Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rnf13O54965 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf13O54965 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf13O54965 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf13O54965 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf13O54965 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf13O54965 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf13O54965 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rnf13O54965 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf13O54965 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Rnf13O54965 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf13O54965 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf13O54965 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf13O54965 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf13O54965 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf13O54965 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.44■□□□□ 0.38
Rnf13O54965 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf13O54965 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rnf13O54965 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf13O54965 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf13O54965 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf13O54965 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf13O54965 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Rnf13O54965 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf13O54965 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rnf13O54965 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.44■□□□□ 0.38
Rnf13O54965 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rnf13O54965 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf13O54965 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Rnf13O54965 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf13O54965 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf13O54965 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf13O54965 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf13O54965 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf13O54965 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.43■□□□□ 0.38
Rnf13O54965 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf13O54965 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf13O54965 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
Rnf13O54965 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rnf13O54965 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf13O54965 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf13O54965 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rnf13O54965 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf13O54965 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf13O54965 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf13O54965 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf13O54965 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf13O54965 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf13O54965 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf13O54965 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf13O54965 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf13O54965 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Rnf13O54965 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf13O54965 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf13O54965 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rnf13O54965 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf13O54965 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf13O54965 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf13O54965 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf13O54965 Gm5812-201ENSMUST00000061073 957 ntBASIC17.41■□□□□ 0.38
Rnf13O54965 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf13O54965 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf13O54965 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rnf13O54965 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.41■□□□□ 0.38
Rnf13O54965 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf13O54965 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rnf13O54965 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Rnf13O54965 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf13O54965 Gm15546-201ENSMUST00000122095 826 ntBASIC17.4■□□□□ 0.38
Rnf13O54965 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rnf13O54965 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rnf13O54965 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf13O54965 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf13O54965 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf13O54965 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.39■□□□□ 0.38
Rnf13O54965 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf13O54965 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf13O54965 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf13O54965 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf13O54965 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf13O54965 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf13O54965 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.38■□□□□ 0.37
Rnf13O54965 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf13O54965 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms