Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Clcn6O35454 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.21■□□□□ 0.83
Clcn6O35454 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Clcn6O35454 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.21■□□□□ 0.83
Clcn6O35454 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn6O35454 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn6O35454 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn6O35454 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn6O35454 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn6O35454 Gm9519-201ENSMUST00000206108 1337 ntBASIC20.21■□□□□ 0.83
Clcn6O35454 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn6O35454 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn6O35454 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn6O35454 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcn6O35454 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Clcn6O35454 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
Clcn6O35454 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Clcn6O35454 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.2■□□□□ 0.82
Clcn6O35454 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn6O35454 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.2■□□□□ 0.82
Clcn6O35454 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn6O35454 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Clcn6O35454 Gm9870-201ENSMUST00000063874 645 ntBASIC20.2■□□□□ 0.82
Clcn6O35454 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn6O35454 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcn6O35454 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn6O35454 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn6O35454 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Clcn6O35454 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn6O35454 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Clcn6O35454 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Clcn6O35454 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
Clcn6O35454 Gm38313-201ENSMUST00000191953 1266 ntBASIC20.19■□□□□ 0.82
Clcn6O35454 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn6O35454 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn6O35454 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcn6O35454 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn6O35454 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn6O35454 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn6O35454 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn6O35454 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn6O35454 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn6O35454 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Clcn6O35454 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Clcn6O35454 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn6O35454 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn6O35454 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn6O35454 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn6O35454 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn6O35454 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Clcn6O35454 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clcn6O35454 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Clcn6O35454 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn6O35454 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn6O35454 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn6O35454 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn6O35454 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Clcn6O35454 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn6O35454 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.16■□□□□ 0.82
Clcn6O35454 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn6O35454 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn6O35454 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn6O35454 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcn6O35454 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn6O35454 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn6O35454 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn6O35454 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Clcn6O35454 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Clcn6O35454 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.15■□□□□ 0.82
Clcn6O35454 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Clcn6O35454 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn6O35454 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn6O35454 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcn6O35454 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Clcn6O35454 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Clcn6O35454 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Clcn6O35454 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn6O35454 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn6O35454 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn6O35454 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn6O35454 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.14■□□□□ 0.81
Clcn6O35454 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC20.14■□□□□ 0.81
Clcn6O35454 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn6O35454 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.14■□□□□ 0.81
Clcn6O35454 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn6O35454 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn6O35454 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.14■□□□□ 0.81
Clcn6O35454 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.14■□□□□ 0.81
Clcn6O35454 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Clcn6O35454 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Clcn6O35454 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn6O35454 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn6O35454 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn6O35454 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Clcn6O35454 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
Clcn6O35454 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn6O35454 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn6O35454 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn6O35454 Gm43377-201ENSMUST00000201640 455 ntBASIC20.13■□□□□ 0.81
Clcn6O35454 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms