Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prrt1O35449 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Prrt1O35449 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prrt1O35449 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prrt1O35449 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Prrt1O35449 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prrt1O35449 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prrt1O35449 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Prrt1O35449 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prrt1O35449 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Prrt1O35449 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Prrt1O35449 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prrt1O35449 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prrt1O35449 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Prrt1O35449 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Prrt1O35449 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.3■□□□□ 0.2
Prrt1O35449 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prrt1O35449 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prrt1O35449 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prrt1O35449 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prrt1O35449 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.29■□□□□ 0.2
Prrt1O35449 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prrt1O35449 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prrt1O35449 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Prrt1O35449 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prrt1O35449 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prrt1O35449 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.29■□□□□ 0.2
Prrt1O35449 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prrt1O35449 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prrt1O35449 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prrt1O35449 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.29■□□□□ 0.2
Prrt1O35449 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prrt1O35449 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.29■□□□□ 0.2
Prrt1O35449 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Prrt1O35449 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prrt1O35449 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prrt1O35449 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prrt1O35449 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prrt1O35449 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prrt1O35449 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Prrt1O35449 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prrt1O35449 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prrt1O35449 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prrt1O35449 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.28■□□□□ 0.2
Prrt1O35449 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prrt1O35449 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.28■□□□□ 0.2
Prrt1O35449 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Prrt1O35449 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prrt1O35449 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Prrt1O35449 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prrt1O35449 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Prrt1O35449 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.27■□□□□ 0.2
Prrt1O35449 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prrt1O35449 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prrt1O35449 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.27■□□□□ 0.2
Prrt1O35449 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prrt1O35449 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.27■□□□□ 0.2
Prrt1O35449 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prrt1O35449 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prrt1O35449 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.27■□□□□ 0.2
Prrt1O35449 Gm10399-202ENSMUST00000202768 748 ntBASIC16.27■□□□□ 0.2
Prrt1O35449 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prrt1O35449 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Prrt1O35449 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prrt1O35449 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Prrt1O35449 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prrt1O35449 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prrt1O35449 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prrt1O35449 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Prrt1O35449 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prrt1O35449 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prrt1O35449 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prrt1O35449 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prrt1O35449 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prrt1O35449 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prrt1O35449 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prrt1O35449 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prrt1O35449 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prrt1O35449 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prrt1O35449 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prrt1O35449 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Prrt1O35449 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.25■□□□□ 0.19
Prrt1O35449 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prrt1O35449 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.25■□□□□ 0.19
Prrt1O35449 Rarb-207ENSMUST00000225921 2756 ntBASIC16.25■□□□□ 0.19
Prrt1O35449 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Prrt1O35449 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prrt1O35449 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prrt1O35449 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prrt1O35449 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Prrt1O35449 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prrt1O35449 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prrt1O35449 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Prrt1O35449 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prrt1O35449 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Prrt1O35449 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Prrt1O35449 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prrt1O35449 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prrt1O35449 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.24■□□□□ 0.19
Prrt1O35449 Grk6-206ENSMUST00000224995 2971 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms