Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.19■□□□□ 0.02
Efnb3O35393 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Efnb3O35393 Gm43530-201ENSMUST00000195920 274 ntBASIC15.19■□□□□ 0.02
Efnb3O35393 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.19■□□□□ 0.02
Efnb3O35393 Gm40881-201ENSMUST00000223397 166 ntBASIC15.19■□□□□ 0.02
Efnb3O35393 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Efnb3O35393 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Efnb3O35393 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Efnb3O35393 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Efnb3O35393 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Efnb3O35393 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.18■□□□□ 0.02
Efnb3O35393 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Efnb3O35393 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Efnb3O35393 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Efnb3O35393 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.18■□□□□ 0.02
Efnb3O35393 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Efnb3O35393 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Efnb3O35393 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Efnb3O35393 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Efnb3O35393 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.18■□□□□ 0.02
Efnb3O35393 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Efnb3O35393 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Efnb3O35393 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Efnb3O35393 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Efnb3O35393 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Efnb3O35393 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Efnb3O35393 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.17■□□□□ 0.02
Efnb3O35393 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Efnb3O35393 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Efnb3O35393 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Efnb3O35393 BC021767-201ENSMUST00000126387 1716 ntBASIC15.17■□□□□ 0.02
Efnb3O35393 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Efnb3O35393 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Efnb3O35393 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.17■□□□□ 0.02
Efnb3O35393 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.16■□□□□ 0.02
Efnb3O35393 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Efnb3O35393 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 Rps24-207ENSMUST00000224568 714 ntBASIC15.16■□□□□ 0.02
Efnb3O35393 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.16■□□□□ 0.02
Efnb3O35393 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Efnb3O35393 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Efnb3O35393 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
Efnb3O35393 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 AA386476-201ENSMUST00000098781 1665 ntBASIC15.16■□□□□ 0.02
Efnb3O35393 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Efnb3O35393 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Efnb3O35393 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Efnb3O35393 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Efnb3O35393 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Efnb3O35393 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.15■□□□□ 0.02
Efnb3O35393 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Efnb3O35393 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.15■□□□□ 0.02
Efnb3O35393 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.15■□□□□ 0.02
Efnb3O35393 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.15■□□□□ 0.02
Efnb3O35393 Gm45102-201ENSMUST00000207427 857 ntBASIC15.15■□□□□ 0.02
Efnb3O35393 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Efnb3O35393 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Efnb3O35393 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Efnb3O35393 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Efnb3O35393 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.15■□□□□ 0.02
Efnb3O35393 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Efnb3O35393 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.15■□□□□ 0.02
Efnb3O35393 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Efnb3O35393 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Efnb3O35393 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Efnb3O35393 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.15■□□□□ 0.02
Efnb3O35393 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.15■□□□□ 0.02
Efnb3O35393 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Efnb3O35393 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Efnb3O35393 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Efnb3O35393 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Efnb3O35393 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Efnb3O35393 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Efnb3O35393 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Efnb3O35393 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Efnb3O35393 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.14■□□□□ 0.01
Efnb3O35393 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms