Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capn1O35350 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capn1O35350 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capn1O35350 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Capn1O35350 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.78■□□□□ 0.44
Capn1O35350 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.78■□□□□ 0.44
Capn1O35350 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capn1O35350 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.78■□□□□ 0.44
Capn1O35350 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Capn1O35350 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Capn1O35350 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Capn1O35350 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Capn1O35350 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Capn1O35350 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Capn1O35350 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.77■□□□□ 0.44
Capn1O35350 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Capn1O35350 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Capn1O35350 Gm37179-201ENSMUST00000194862 823 ntBASIC17.77■□□□□ 0.44
Capn1O35350 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Capn1O35350 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Capn1O35350 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Capn1O35350 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Capn1O35350 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Capn1O35350 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Capn1O35350 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Capn1O35350 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.77■□□□□ 0.43
Capn1O35350 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capn1O35350 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capn1O35350 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capn1O35350 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Capn1O35350 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capn1O35350 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.76■□□□□ 0.43
Capn1O35350 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.76■□□□□ 0.43
Capn1O35350 Gm18671-201ENSMUST00000214826 683 ntBASIC17.76■□□□□ 0.43
Capn1O35350 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.76■□□□□ 0.43
Capn1O35350 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capn1O35350 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Capn1O35350 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capn1O35350 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capn1O35350 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capn1O35350 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Capn1O35350 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Capn1O35350 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Capn1O35350 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Capn1O35350 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capn1O35350 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capn1O35350 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Capn1O35350 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Capn1O35350 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.75■□□□□ 0.43
Capn1O35350 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.75■□□□□ 0.43
Capn1O35350 AV356131-201ENSMUST00000206201 750 ntBASIC17.75■□□□□ 0.43
Capn1O35350 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capn1O35350 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capn1O35350 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capn1O35350 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capn1O35350 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.75■□□□□ 0.43
Capn1O35350 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.75■□□□□ 0.43
Capn1O35350 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Capn1O35350 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Capn1O35350 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.74■□□□□ 0.43
Capn1O35350 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Capn1O35350 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capn1O35350 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Capn1O35350 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capn1O35350 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.74■□□□□ 0.43
Capn1O35350 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capn1O35350 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capn1O35350 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Capn1O35350 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Capn1O35350 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Capn1O35350 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capn1O35350 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capn1O35350 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capn1O35350 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Capn1O35350 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Capn1O35350 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Capn1O35350 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Capn1O35350 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.73■□□□□ 0.43
Capn1O35350 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Capn1O35350 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Capn1O35350 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.73■□□□□ 0.43
Capn1O35350 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.73■□□□□ 0.43
Capn1O35350 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Capn1O35350 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Capn1O35350 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Capn1O35350 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Capn1O35350 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Capn1O35350 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Capn1O35350 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Capn1O35350 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Capn1O35350 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.72■□□□□ 0.43
Capn1O35350 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Capn1O35350 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Capn1O35350 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Capn1O35350 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Capn1O35350 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.72■□□□□ 0.43
Capn1O35350 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.72■□□□□ 0.43
Capn1O35350 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Capn1O35350 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Capn1O35350 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms