Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cx3cl1O35188 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.08■□□□□ 0.48
Cx3cl1O35188 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cx3cl1O35188 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cx3cl1O35188 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cx3cl1O35188 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.07■□□□□ 0.48
Cx3cl1O35188 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.07■□□□□ 0.48
Cx3cl1O35188 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cx3cl1O35188 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cx3cl1O35188 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cx3cl1O35188 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.06■□□□□ 0.48
Cx3cl1O35188 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cx3cl1O35188 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cl1O35188 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cx3cl1O35188 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cx3cl1O35188 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.03■□□□□ 0.48
Cx3cl1O35188 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cl1O35188 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cl1O35188 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cl1O35188 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cl1O35188 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cl1O35188 Gm27801-201ENSMUST00000184174 223 ntBASIC18.03■□□□□ 0.48
Cx3cl1O35188 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cl1O35188 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cl1O35188 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Cx3cl1O35188 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cl1O35188 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cx3cl1O35188 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cx3cl1O35188 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cx3cl1O35188 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cx3cl1O35188 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cx3cl1O35188 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cx3cl1O35188 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.02■□□□□ 0.48
Cx3cl1O35188 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cx3cl1O35188 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cx3cl1O35188 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cx3cl1O35188 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cx3cl1O35188 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cx3cl1O35188 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cx3cl1O35188 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cx3cl1O35188 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cx3cl1O35188 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cx3cl1O35188 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.01■□□□□ 0.47
Cx3cl1O35188 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Cx3cl1O35188 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cx3cl1O35188 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cx3cl1O35188 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cx3cl1O35188 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cx3cl1O35188 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cx3cl1O35188 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cx3cl1O35188 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cx3cl1O35188 Golph3-202ENSMUST00000226517 2359 ntBASIC18■□□□□ 0.47
Cx3cl1O35188 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms