Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
OtpO09113 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
OtpO09113 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
OtpO09113 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
OtpO09113 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
OtpO09113 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
OtpO09113 Gm43137-201ENSMUST00000198052 594 ntBASIC17.15■□□□□ 0.34
OtpO09113 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OtpO09113 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
OtpO09113 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
OtpO09113 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OtpO09113 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
OtpO09113 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
OtpO09113 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
OtpO09113 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.14■□□□□ 0.33
OtpO09113 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.14■□□□□ 0.33
OtpO09113 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
OtpO09113 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OtpO09113 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
OtpO09113 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
OtpO09113 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
OtpO09113 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
OtpO09113 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OtpO09113 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OtpO09113 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OtpO09113 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
OtpO09113 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
OtpO09113 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
OtpO09113 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
OtpO09113 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
OtpO09113 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
OtpO09113 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OtpO09113 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OtpO09113 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OtpO09113 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OtpO09113 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.13■□□□□ 0.33
OtpO09113 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.13■□□□□ 0.33
OtpO09113 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
OtpO09113 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OtpO09113 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OtpO09113 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
OtpO09113 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.13■□□□□ 0.33
OtpO09113 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
OtpO09113 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
OtpO09113 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
OtpO09113 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OtpO09113 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
OtpO09113 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
OtpO09113 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
OtpO09113 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.12■□□□□ 0.33
OtpO09113 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OtpO09113 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
OtpO09113 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
OtpO09113 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
OtpO09113 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
OtpO09113 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OtpO09113 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
OtpO09113 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
OtpO09113 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.12■□□□□ 0.33
OtpO09113 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.12■□□□□ 0.33
OtpO09113 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
OtpO09113 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
OtpO09113 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
OtpO09113 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OtpO09113 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
OtpO09113 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
OtpO09113 Gm12251-201ENSMUST00000117893 792 ntBASIC17.11■□□□□ 0.33
OtpO09113 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
OtpO09113 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
OtpO09113 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OtpO09113 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OtpO09113 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
OtpO09113 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OtpO09113 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
OtpO09113 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
OtpO09113 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OtpO09113 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OtpO09113 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
OtpO09113 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
OtpO09113 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OtpO09113 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
OtpO09113 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
OtpO09113 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OtpO09113 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OtpO09113 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OtpO09113 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OtpO09113 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OtpO09113 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
OtpO09113 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
OtpO09113 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.09■□□□□ 0.33
OtpO09113 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.09■□□□□ 0.33
OtpO09113 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.09■□□□□ 0.33
OtpO09113 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.09■□□□□ 0.33
OtpO09113 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.09■□□□□ 0.33
OtpO09113 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.09■□□□□ 0.33
OtpO09113 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
OtpO09113 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
OtpO09113 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
OtpO09113 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
OtpO09113 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms