Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ebf3O08791 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ebf3O08791 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ebf3O08791 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.99■□□□□ 0.79
Ebf3O08791 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.99■□□□□ 0.79
Ebf3O08791 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ebf3O08791 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ebf3O08791 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ebf3O08791 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ebf3O08791 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ebf3O08791 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ebf3O08791 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ebf3O08791 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ebf3O08791 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ebf3O08791 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ebf3O08791 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ebf3O08791 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ebf3O08791 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ebf3O08791 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ebf3O08791 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.97■□□□□ 0.79
Ebf3O08791 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ebf3O08791 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ebf3O08791 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ebf3O08791 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ebf3O08791 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.96■□□□□ 0.79
Ebf3O08791 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ebf3O08791 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ebf3O08791 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ebf3O08791 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ebf3O08791 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ebf3O08791 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ebf3O08791 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ebf3O08791 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ebf3O08791 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.95■□□□□ 0.78
Ebf3O08791 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.95■□□□□ 0.78
Ebf3O08791 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ebf3O08791 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ebf3O08791 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf3O08791 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf3O08791 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf3O08791 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf3O08791 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf3O08791 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.94■□□□□ 0.78
Ebf3O08791 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ebf3O08791 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf3O08791 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf3O08791 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf3O08791 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf3O08791 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.94■□□□□ 0.78
Ebf3O08791 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf3O08791 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf3O08791 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Ebf3O08791 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf3O08791 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf3O08791 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.94■□□□□ 0.78
Ebf3O08791 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ebf3O08791 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ebf3O08791 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ebf3O08791 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.93■□□□□ 0.78
Ebf3O08791 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ebf3O08791 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ebf3O08791 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ebf3O08791 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ebf3O08791 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ebf3O08791 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ebf3O08791 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ebf3O08791 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ebf3O08791 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ebf3O08791 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ebf3O08791 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ebf3O08791 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ebf3O08791 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.92■□□□□ 0.78
Ebf3O08791 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.92■□□□□ 0.78
Ebf3O08791 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ebf3O08791 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ebf3O08791 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ebf3O08791 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ebf3O08791 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ebf3O08791 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Ebf3O08791 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.92■□□□□ 0.78
Ebf3O08791 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ebf3O08791 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ebf3O08791 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ebf3O08791 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ebf3O08791 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ebf3O08791 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.91■□□□□ 0.78
Ebf3O08791 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ebf3O08791 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ebf3O08791 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ebf3O08791 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.91■□□□□ 0.78
Ebf3O08791 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ebf3O08791 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ebf3O08791 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.9■□□□□ 0.78
Ebf3O08791 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.9■□□□□ 0.78
Ebf3O08791 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ebf3O08791 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ebf3O08791 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ebf3O08791 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ebf3O08791 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ebf3O08791 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms