Protein–RNA interactions for Protein: O08529

Capn2, Calpain-2 catalytic subunit, mousemouse

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn2O08529 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Capn2O08529 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Capn2O08529 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Capn2O08529 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Capn2O08529 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Capn2O08529 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Capn2O08529 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Capn2O08529 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.53■■□□□ 1.04
Capn2O08529 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Capn2O08529 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Capn2O08529 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Capn2O08529 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
Capn2O08529 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Capn2O08529 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Capn2O08529 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Capn2O08529 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Capn2O08529 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Capn2O08529 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.52■■□□□ 1.04
Capn2O08529 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Capn2O08529 Gm20760-201ENSMUST00000179197 648 ntBASIC21.52■■□□□ 1.04
Capn2O08529 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.52■■□□□ 1.04
Capn2O08529 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Capn2O08529 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Capn2O08529 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Capn2O08529 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Capn2O08529 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Capn2O08529 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Capn2O08529 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Capn2O08529 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Capn2O08529 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Capn2O08529 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Capn2O08529 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Capn2O08529 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Capn2O08529 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Capn2O08529 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Capn2O08529 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Capn2O08529 Gm13234-201ENSMUST00000120010 747 ntBASIC21.51■■□□□ 1.03
Capn2O08529 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Capn2O08529 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Capn2O08529 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Capn2O08529 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Capn2O08529 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Capn2O08529 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Capn2O08529 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Capn2O08529 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Capn2O08529 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.5■■□□□ 1.03
Capn2O08529 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Capn2O08529 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Capn2O08529 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Capn2O08529 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Capn2O08529 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Capn2O08529 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Capn2O08529 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Capn2O08529 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Capn2O08529 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.49■■□□□ 1.03
Capn2O08529 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Capn2O08529 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Capn2O08529 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Capn2O08529 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Capn2O08529 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Capn2O08529 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.48■■□□□ 1.03
Capn2O08529 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Capn2O08529 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Capn2O08529 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Capn2O08529 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.48■■□□□ 1.03
Capn2O08529 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Capn2O08529 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Capn2O08529 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Capn2O08529 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Capn2O08529 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Capn2O08529 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Capn2O08529 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Capn2O08529 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
Capn2O08529 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Capn2O08529 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Capn2O08529 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.47■■□□□ 1.03
Capn2O08529 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.47■■□□□ 1.03
Capn2O08529 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Capn2O08529 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Capn2O08529 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Capn2O08529 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Capn2O08529 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Capn2O08529 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.47■■□□□ 1.03
Capn2O08529 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.47■■□□□ 1.03
Capn2O08529 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.47■■□□□ 1.03
Capn2O08529 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Capn2O08529 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Capn2O08529 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Capn2O08529 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Capn2O08529 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Capn2O08529 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Capn2O08529 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Capn2O08529 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC21.46■■□□□ 1.03
Capn2O08529 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Capn2O08529 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Capn2O08529 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Capn2O08529 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.46■■□□□ 1.03
Capn2O08529 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Capn2O08529 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Capn2O08529 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms