Protein–RNA interactions for Protein: F7BCN0

Gm28048, Predicted gene, 28048 (Fragment), mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28048F7BCN0 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.8■□□□□ 0.44
Gm28048F7BCN0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Gm28048F7BCN0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Gm28048F7BCN0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28048F7BCN0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28048F7BCN0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28048F7BCN0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28048F7BCN0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm28048F7BCN0 AA386476-201ENSMUST00000098781 1665 ntBASIC17.8■□□□□ 0.44
Gm28048F7BCN0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Gm28048F7BCN0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm28048F7BCN0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 BC021767-201ENSMUST00000126387 1716 ntBASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Gm5921-201ENSMUST00000075898 882 ntBASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm28048F7BCN0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28048F7BCN0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28048F7BCN0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28048F7BCN0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Gm28048F7BCN0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28048F7BCN0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.77■□□□□ 0.44
Gm28048F7BCN0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28048F7BCN0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Gm28048F7BCN0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28048F7BCN0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm28048F7BCN0 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.77■□□□□ 0.43
Gm28048F7BCN0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.76■□□□□ 0.43
Gm28048F7BCN0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Gm28048F7BCN0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28048F7BCN0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Gm9870-201ENSMUST00000063874 645 ntBASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Gm28048F7BCN0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms