Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28305F6U473 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28305F6U473 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Gm28305F6U473 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gm28305F6U473 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28305F6U473 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28305F6U473 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Gm28305F6U473 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28305F6U473 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28305F6U473 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28305F6U473 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28305F6U473 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gm28305F6U473 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Gm28305F6U473 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.27□□□□□ -0.13
Gm28305F6U473 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.27□□□□□ -0.13
Gm28305F6U473 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.27□□□□□ -0.13
Gm28305F6U473 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.27□□□□□ -0.13
Gm28305F6U473 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Gm28305F6U473 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Gm28305F6U473 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.27□□□□□ -0.13
Gm28305F6U473 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.27□□□□□ -0.13
Gm28305F6U473 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.27□□□□□ -0.13
Gm28305F6U473 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28305F6U473 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28305F6U473 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28305F6U473 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28305F6U473 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28305F6U473 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.26□□□□□ -0.13
Gm28305F6U473 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28305F6U473 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28305F6U473 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28305F6U473 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28305F6U473 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Gm28305F6U473 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28305F6U473 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.26□□□□□ -0.13
Gm28305F6U473 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28305F6U473 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28305F6U473 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Gm28305F6U473 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Gm28305F6U473 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Gm28305F6U473 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Gm28305F6U473 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Gm28305F6U473 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Gm28305F6U473 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Gm28305F6U473 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Gm28305F6U473 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm28305F6U473 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.24□□□□□ -0.13
Gm28305F6U473 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gm28305F6U473 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28305F6U473 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28305F6U473 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.23□□□□□ -0.13
Gm28305F6U473 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28305F6U473 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28305F6U473 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28305F6U473 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.23□□□□□ -0.13
Gm28305F6U473 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28305F6U473 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.23□□□□□ -0.13
Gm28305F6U473 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Gm28305F6U473 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28305F6U473 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gm28305F6U473 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.23□□□□□ -0.13
Gm28305F6U473 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28305F6U473 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28305F6U473 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28305F6U473 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28305F6U473 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28305F6U473 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gm28305F6U473 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Gm28305F6U473 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28305F6U473 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28305F6U473 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28305F6U473 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms