Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh17E9PXF0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh17E9PXF0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh17E9PXF0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh17E9PXF0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh17E9PXF0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh17E9PXF0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcdh17E9PXF0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh17E9PXF0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh17E9PXF0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh17E9PXF0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh17E9PXF0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh17E9PXF0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh17E9PXF0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Pcdh17E9PXF0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh17E9PXF0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh17E9PXF0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Pcdh17E9PXF0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh17E9PXF0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdh17E9PXF0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh17E9PXF0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh17E9PXF0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh17E9PXF0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Pcdh17E9PXF0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh17E9PXF0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh17E9PXF0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh17E9PXF0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.89■□□□□ 0.45
Pcdh17E9PXF0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh17E9PXF0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh17E9PXF0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh17E9PXF0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.89■□□□□ 0.45
Pcdh17E9PXF0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh17E9PXF0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh17E9PXF0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh17E9PXF0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh17E9PXF0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh17E9PXF0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.87■□□□□ 0.45
Pcdh17E9PXF0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh17E9PXF0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh17E9PXF0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh17E9PXF0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdh17E9PXF0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh17E9PXF0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh17E9PXF0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh17E9PXF0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdh17E9PXF0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdh17E9PXF0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdh17E9PXF0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh17E9PXF0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh17E9PXF0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdh17E9PXF0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh17E9PXF0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdh17E9PXF0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh17E9PXF0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh17E9PXF0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh17E9PXF0 Gm12933-201ENSMUST00000120203 872 ntBASIC17.85■□□□□ 0.45
Pcdh17E9PXF0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pcdh17E9PXF0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Pcdh17E9PXF0 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.85■□□□□ 0.45
Pcdh17E9PXF0 Gm7514-201ENSMUST00000209475 934 ntBASIC17.85■□□□□ 0.45
Pcdh17E9PXF0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh17E9PXF0 Gm10602-201ENSMUST00000098239 609 ntBASIC17.85■□□□□ 0.45
Pcdh17E9PXF0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh17E9PXF0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.84■□□□□ 0.45
Pcdh17E9PXF0 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.84■□□□□ 0.45
Pcdh17E9PXF0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh17E9PXF0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh17E9PXF0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh17E9PXF0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdh17E9PXF0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh17E9PXF0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh17E9PXF0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdh17E9PXF0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh17E9PXF0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdh17E9PXF0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdh17E9PXF0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh17E9PXF0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh17E9PXF0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh17E9PXF0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdh17E9PXF0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.83■□□□□ 0.44
Pcdh17E9PXF0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.83■□□□□ 0.44
Pcdh17E9PXF0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh17E9PXF0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Pcdh17E9PXF0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh17E9PXF0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh17E9PXF0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh17E9PXF0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms