Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col6a3E9PWQ3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a3E9PWQ3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.7■□□□□ 0.74
Col6a3E9PWQ3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a3E9PWQ3 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.7■□□□□ 0.74
Col6a3E9PWQ3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a3E9PWQ3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a3E9PWQ3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a3E9PWQ3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a3E9PWQ3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.7■□□□□ 0.74
Col6a3E9PWQ3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a3E9PWQ3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col6a3E9PWQ3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a3E9PWQ3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a3E9PWQ3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a3E9PWQ3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Col6a3E9PWQ3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col6a3E9PWQ3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.69■□□□□ 0.74
Col6a3E9PWQ3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.68■□□□□ 0.74
Col6a3E9PWQ3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a3E9PWQ3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a3E9PWQ3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a3E9PWQ3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a3E9PWQ3 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.68■□□□□ 0.74
Col6a3E9PWQ3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a3E9PWQ3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a3E9PWQ3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a3E9PWQ3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a3E9PWQ3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.68■□□□□ 0.74
Col6a3E9PWQ3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col6a3E9PWQ3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a3E9PWQ3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Col6a3E9PWQ3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a3E9PWQ3 Gm21814-202ENSMUST00000203277 873 ntBASIC19.67■□□□□ 0.74
Col6a3E9PWQ3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a3E9PWQ3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Col6a3E9PWQ3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Col6a3E9PWQ3 Gm2399-201ENSMUST00000104944 225 ntBASIC19.66■□□□□ 0.74
Col6a3E9PWQ3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a3E9PWQ3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a3E9PWQ3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a3E9PWQ3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Col6a3E9PWQ3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.65■□□□□ 0.74
Col6a3E9PWQ3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.65■□□□□ 0.74
Col6a3E9PWQ3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a3E9PWQ3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a3E9PWQ3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col6a3E9PWQ3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.65■□□□□ 0.74
Col6a3E9PWQ3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.64■□□□□ 0.74
Col6a3E9PWQ3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a3E9PWQ3 Gm14859-201ENSMUST00000117752 357 ntBASIC19.64■□□□□ 0.73
Col6a3E9PWQ3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Col6a3E9PWQ3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a3E9PWQ3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.64■□□□□ 0.73
Col6a3E9PWQ3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col6a3E9PWQ3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.64■□□□□ 0.73
Col6a3E9PWQ3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a3E9PWQ3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a3E9PWQ3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a3E9PWQ3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a3E9PWQ3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a3E9PWQ3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a3E9PWQ3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a3E9PWQ3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col6a3E9PWQ3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.63■□□□□ 0.73
Col6a3E9PWQ3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col6a3E9PWQ3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a3E9PWQ3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a3E9PWQ3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Col6a3E9PWQ3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Col6a3E9PWQ3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a3E9PWQ3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a3E9PWQ3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a3E9PWQ3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.62■□□□□ 0.73
Col6a3E9PWQ3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a3E9PWQ3 Gm43514-201ENSMUST00000198852 424 ntBASIC19.62■□□□□ 0.73
Col6a3E9PWQ3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 Gm30025-201ENSMUST00000218555 728 ntBASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 Gm7284-201ENSMUST00000131667 944 ntBASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a3E9PWQ3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms