Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28043E0CXC2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Gm28043E0CXC2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28043E0CXC2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28043E0CXC2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Gm28043E0CXC2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Gm28043E0CXC2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28043E0CXC2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28043E0CXC2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28043E0CXC2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Gm28043E0CXC2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28043E0CXC2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28043E0CXC2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28043E0CXC2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28043E0CXC2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.23■□□□□ 0.67
Gm28043E0CXC2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28043E0CXC2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28043E0CXC2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28043E0CXC2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28043E0CXC2 Gm13241-201ENSMUST00000094493 780 ntBASIC19.23■□□□□ 0.67
Gm28043E0CXC2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Gm28043E0CXC2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28043E0CXC2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28043E0CXC2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28043E0CXC2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.23■□□□□ 0.67
Gm28043E0CXC2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28043E0CXC2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Gm28043E0CXC2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28043E0CXC2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28043E0CXC2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28043E0CXC2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28043E0CXC2 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.22■□□□□ 0.67
Gm28043E0CXC2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28043E0CXC2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Gm28043E0CXC2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28043E0CXC2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28043E0CXC2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28043E0CXC2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm28043E0CXC2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28043E0CXC2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28043E0CXC2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Gm28043E0CXC2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28043E0CXC2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.2■□□□□ 0.66
Gm28043E0CXC2 Golph3-205ENSMUST00000228671 2842 ntBASIC19.2■□□□□ 0.66
Gm28043E0CXC2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm28043E0CXC2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Gm28043E0CXC2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28043E0CXC2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28043E0CXC2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28043E0CXC2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Gm28043E0CXC2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.19■□□□□ 0.66
Gm28043E0CXC2 Mir6236-201ENSMUST00000184437 123 ntBASIC19.19■□□□□ 0.66
Gm28043E0CXC2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28043E0CXC2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28043E0CXC2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28043E0CXC2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28043E0CXC2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gm28043E0CXC2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Gm28043E0CXC2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28043E0CXC2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm28043E0CXC2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28043E0CXC2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28043E0CXC2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28043E0CXC2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28043E0CXC2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Gm28043E0CXC2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28043E0CXC2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.18■□□□□ 0.66
Gm28043E0CXC2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28043E0CXC2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Gm28043E0CXC2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm28043E0CXC2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm28043E0CXC2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.17■□□□□ 0.66
Gm28043E0CXC2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Gm28043E0CXC2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Gm28043E0CXC2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm28043E0CXC2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm28043E0CXC2 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.17■□□□□ 0.66
Gm28043E0CXC2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms