Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.22■□□□□ 0.83
Col4a6B1AVK5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Col4a6B1AVK5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col4a6B1AVK5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a6B1AVK5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a6B1AVK5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a6B1AVK5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a6B1AVK5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Col4a6B1AVK5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a6B1AVK5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col4a6B1AVK5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a6B1AVK5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a6B1AVK5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a6B1AVK5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a6B1AVK5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a6B1AVK5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a6B1AVK5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a6B1AVK5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a6B1AVK5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col4a6B1AVK5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Col4a6B1AVK5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.19■□□□□ 0.82
Col4a6B1AVK5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a6B1AVK5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a6B1AVK5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.19■□□□□ 0.82
Col4a6B1AVK5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.19■□□□□ 0.82
Col4a6B1AVK5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.19■□□□□ 0.82
Col4a6B1AVK5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a6B1AVK5 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.19■□□□□ 0.82
Col4a6B1AVK5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a6B1AVK5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a6B1AVK5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col4a6B1AVK5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a6B1AVK5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a6B1AVK5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a6B1AVK5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a6B1AVK5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a6B1AVK5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col4a6B1AVK5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Col4a6B1AVK5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.17■□□□□ 0.82
Col4a6B1AVK5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a6B1AVK5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col4a6B1AVK5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Col4a6B1AVK5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
Col4a6B1AVK5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a6B1AVK5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.16■□□□□ 0.82
Col4a6B1AVK5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a6B1AVK5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Col4a6B1AVK5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Col4a6B1AVK5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a6B1AVK5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col4a6B1AVK5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.15■□□□□ 0.82
Col4a6B1AVK5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a6B1AVK5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a6B1AVK5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col4a6B1AVK5 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Col4a6B1AVK5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a6B1AVK5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Col4a6B1AVK5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Col4a6B1AVK5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a6B1AVK5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.14■□□□□ 0.81
Col4a6B1AVK5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.14■□□□□ 0.81
Col4a6B1AVK5 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.14■□□□□ 0.81
Col4a6B1AVK5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a6B1AVK5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Col4a6B1AVK5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.14■□□□□ 0.81
Col4a6B1AVK5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.13■□□□□ 0.81
Col4a6B1AVK5 Gm5643-201ENSMUST00000117081 966 ntBASIC20.13■□□□□ 0.81
Col4a6B1AVK5 Gm12896-201ENSMUST00000118430 226 ntBASIC20.13■□□□□ 0.81
Col4a6B1AVK5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Col4a6B1AVK5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.13■□□□□ 0.81
Col4a6B1AVK5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col4a6B1AVK5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col4a6B1AVK5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Col4a6B1AVK5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Col4a6B1AVK5 Dio3-201ENSMUST00000097228 1449 ntBASIC20.13■□□□□ 0.81
Col4a6B1AVK5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a6B1AVK5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a6B1AVK5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a6B1AVK5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a6B1AVK5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a6B1AVK5 Gm7977-201ENSMUST00000193787 748 ntBASIC20.12■□□□□ 0.81
Col4a6B1AVK5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col4a6B1AVK5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.12■□□□□ 0.81
Col4a6B1AVK5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a6B1AVK5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Col4a6B1AVK5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a6B1AVK5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Col4a6B1AVK5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a6B1AVK5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a6B1AVK5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a6B1AVK5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col4a6B1AVK5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a6B1AVK5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.1■□□□□ 0.81
Col4a6B1AVK5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a6B1AVK5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a6B1AVK5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.1■□□□□ 0.81
Col4a6B1AVK5 Mir6982-201ENSMUST00000184354 68 ntBASIC20.1■□□□□ 0.81
Col4a6B1AVK5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a6B1AVK5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col4a6B1AVK5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms