Protein–RNA interactions for Protein: B1AUS7

Ssxa1, Protein SSXA1, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxa1B1AUS7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 Gm27801-201ENSMUST00000184174 223 ntBASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssxa1B1AUS7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
Ssxa1B1AUS7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssxa1B1AUS7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssxa1B1AUS7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssxa1B1AUS7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssxa1B1AUS7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.38■□□□□ 0.53
Ssxa1B1AUS7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ssxa1B1AUS7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssxa1B1AUS7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Ssxa1B1AUS7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssxa1B1AUS7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
Ssxa1B1AUS7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssxa1B1AUS7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssxa1B1AUS7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ssxa1B1AUS7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.37■□□□□ 0.53
Ssxa1B1AUS7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssxa1B1AUS7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Ssxa1B1AUS7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssxa1B1AUS7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ssxa1B1AUS7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.37■□□□□ 0.53
Ssxa1B1AUS7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ssxa1B1AUS7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssxa1B1AUS7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ssxa1B1AUS7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ssxa1B1AUS7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ssxa1B1AUS7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssxa1B1AUS7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssxa1B1AUS7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Ssxa1B1AUS7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssxa1B1AUS7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.36■□□□□ 0.53
Ssxa1B1AUS7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.36■□□□□ 0.53
Ssxa1B1AUS7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssxa1B1AUS7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssxa1B1AUS7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssxa1B1AUS7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
Ssxa1B1AUS7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssxa1B1AUS7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssxa1B1AUS7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssxa1B1AUS7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssxa1B1AUS7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssxa1B1AUS7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssxa1B1AUS7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssxa1B1AUS7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ssxa1B1AUS7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssxa1B1AUS7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssxa1B1AUS7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssxa1B1AUS7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssxa1B1AUS7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.34■□□□□ 0.53
Ssxa1B1AUS7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssxa1B1AUS7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssxa1B1AUS7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssxa1B1AUS7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssxa1B1AUS7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssxa1B1AUS7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.33■□□□□ 0.52
Ssxa1B1AUS7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssxa1B1AUS7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssxa1B1AUS7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssxa1B1AUS7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ssxa1B1AUS7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssxa1B1AUS7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ssxa1B1AUS7 Golph3-202ENSMUST00000226517 2359 ntBASIC18.32■□□□□ 0.52
Ssxa1B1AUS7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssxa1B1AUS7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssxa1B1AUS7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ssxa1B1AUS7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssxa1B1AUS7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ssxa1B1AUS7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ssxa1B1AUS7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.32■□□□□ 0.52
Ssxa1B1AUS7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.32■□□□□ 0.52
Ssxa1B1AUS7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ssxa1B1AUS7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.32■□□□□ 0.52
Ssxa1B1AUS7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms