Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.79□□□□□ -0.04
Col6a5A6H584 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a5A6H584 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a5A6H584 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a5A6H584 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.79□□□□□ -0.04
Col6a5A6H584 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col6a5A6H584 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a5A6H584 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Col6a5A6H584 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a5A6H584 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a5A6H584 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.79□□□□□ -0.04
Col6a5A6H584 Gm7461-201ENSMUST00000058918 827 ntBASIC14.79□□□□□ -0.04
Col6a5A6H584 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a5A6H584 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a5A6H584 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a5A6H584 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a5A6H584 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a5A6H584 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col6a5A6H584 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.78□□□□□ -0.04
Col6a5A6H584 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col6a5A6H584 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col6a5A6H584 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a5A6H584 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a5A6H584 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.78□□□□□ -0.04
Col6a5A6H584 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col6a5A6H584 Gm2399-201ENSMUST00000104944 225 ntBASIC14.78□□□□□ -0.04
Col6a5A6H584 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a5A6H584 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a5A6H584 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a5A6H584 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.77□□□□□ -0.04
Col6a5A6H584 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.77□□□□□ -0.04
Col6a5A6H584 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Col6a5A6H584 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a5A6H584 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a5A6H584 Gm23634-201ENSMUST00000175071 91 ntBASIC14.77□□□□□ -0.04
Col6a5A6H584 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a5A6H584 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a5A6H584 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a5A6H584 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a5A6H584 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
Col6a5A6H584 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.76□□□□□ -0.05
Col6a5A6H584 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a5A6H584 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a5A6H584 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a5A6H584 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Col6a5A6H584 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a5A6H584 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a5A6H584 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a5A6H584 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a5A6H584 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a5A6H584 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a5A6H584 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a5A6H584 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a5A6H584 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a5A6H584 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a5A6H584 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a5A6H584 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.75□□□□□ -0.05
Col6a5A6H584 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Col6a5A6H584 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Col6a5A6H584 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.75□□□□□ -0.05
Col6a5A6H584 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a5A6H584 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a5A6H584 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a5A6H584 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a5A6H584 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a5A6H584 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a5A6H584 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a5A6H584 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a5A6H584 Gm7889-201ENSMUST00000185591 958 ntBASIC14.74□□□□□ -0.05
Col6a5A6H584 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.74□□□□□ -0.05
Col6a5A6H584 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a5A6H584 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a5A6H584 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a5A6H584 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Col6a5A6H584 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Col6a5A6H584 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a5A6H584 Gm10013-201ENSMUST00000106074 672 ntBASIC14.74□□□□□ -0.05
Col6a5A6H584 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Col6a5A6H584 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a5A6H584 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.74□□□□□ -0.05
Col6a5A6H584 Gm33142-201ENSMUST00000193913 867 ntBASIC14.74□□□□□ -0.05
Col6a5A6H584 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.74□□□□□ -0.05
Col6a5A6H584 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a5A6H584 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a5A6H584 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a5A6H584 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a5A6H584 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a5A6H584 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
Col6a5A6H584 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a5A6H584 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a5A6H584 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a5A6H584 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.73□□□□□ -0.05
Col6a5A6H584 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.73□□□□□ -0.05
Col6a5A6H584 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.73□□□□□ -0.05
Col6a5A6H584 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a5A6H584 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a5A6H584 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.73□□□□□ -0.05
Col6a5A6H584 Mir6236-201ENSMUST00000184437 123 ntBASIC14.72□□□□□ -0.05
Col6a5A6H584 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a5A6H584 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms