Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd6A3KFM7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd6A3KFM7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Chd6A3KFM7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chd6A3KFM7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd6A3KFM7 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.9■□□□□ 0.14
Chd6A3KFM7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd6A3KFM7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chd6A3KFM7 Gm6345-202ENSMUST00000180900 204 ntBASIC15.9■□□□□ 0.14
Chd6A3KFM7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.9■□□□□ 0.14
Chd6A3KFM7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.9■□□□□ 0.14
Chd6A3KFM7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chd6A3KFM7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
Chd6A3KFM7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chd6A3KFM7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chd6A3KFM7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd6A3KFM7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.89■□□□□ 0.13
Chd6A3KFM7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chd6A3KFM7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd6A3KFM7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd6A3KFM7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd6A3KFM7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd6A3KFM7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chd6A3KFM7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd6A3KFM7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chd6A3KFM7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chd6A3KFM7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd6A3KFM7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd6A3KFM7 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.88■□□□□ 0.13
Chd6A3KFM7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd6A3KFM7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Chd6A3KFM7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Chd6A3KFM7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd6A3KFM7 AA414768-201ENSMUST00000121924 1257 ntBASIC15.88■□□□□ 0.13
Chd6A3KFM7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd6A3KFM7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd6A3KFM7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd6A3KFM7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chd6A3KFM7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chd6A3KFM7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd6A3KFM7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd6A3KFM7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chd6A3KFM7 Gm43514-201ENSMUST00000198852 424 ntBASIC15.87■□□□□ 0.13
Chd6A3KFM7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd6A3KFM7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd6A3KFM7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd6A3KFM7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chd6A3KFM7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd6A3KFM7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chd6A3KFM7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Chd6A3KFM7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chd6A3KFM7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd6A3KFM7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.86■□□□□ 0.13
Chd6A3KFM7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Chd6A3KFM7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.86■□□□□ 0.13
Chd6A3KFM7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd6A3KFM7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd6A3KFM7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd6A3KFM7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd6A3KFM7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chd6A3KFM7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd6A3KFM7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chd6A3KFM7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.85■□□□□ 0.13
Chd6A3KFM7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Chd6A3KFM7 Gm13559-201ENSMUST00000120476 863 ntBASIC15.85■□□□□ 0.13
Chd6A3KFM7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd6A3KFM7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.85■□□□□ 0.13
Chd6A3KFM7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd6A3KFM7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.85■□□□□ 0.13
Chd6A3KFM7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chd6A3KFM7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chd6A3KFM7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd6A3KFM7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chd6A3KFM7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chd6A3KFM7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chd6A3KFM7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd6A3KFM7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd6A3KFM7 Gm7889-201ENSMUST00000185591 958 ntBASIC15.84■□□□□ 0.13
Chd6A3KFM7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.84■□□□□ 0.13
Chd6A3KFM7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.84■□□□□ 0.13
Chd6A3KFM7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.84■□□□□ 0.13
Chd6A3KFM7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Chd6A3KFM7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd6A3KFM7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd6A3KFM7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chd6A3KFM7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chd6A3KFM7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.84■□□□□ 0.13
Chd6A3KFM7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chd6A3KFM7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Chd6A3KFM7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chd6A3KFM7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chd6A3KFM7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chd6A3KFM7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd6A3KFM7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Chd6A3KFM7 Gm2399-201ENSMUST00000104944 225 ntBASIC15.83■□□□□ 0.12
Chd6A3KFM7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Chd6A3KFM7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chd6A3KFM7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.83■□□□□ 0.12
Chd6A3KFM7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chd6A3KFM7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms