Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28729A0A1B0GSW2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28729A0A1B0GSW2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.94■□□□□ 0.62
Gm28729A0A1B0GSW2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.94■□□□□ 0.62
Gm28729A0A1B0GSW2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28729A0A1B0GSW2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28729A0A1B0GSW2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28729A0A1B0GSW2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28729A0A1B0GSW2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28729A0A1B0GSW2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28729A0A1B0GSW2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.93■□□□□ 0.62
Gm28729A0A1B0GSW2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.93■□□□□ 0.62
Gm28729A0A1B0GSW2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28729A0A1B0GSW2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28729A0A1B0GSW2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28729A0A1B0GSW2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Gm28729A0A1B0GSW2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28729A0A1B0GSW2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28729A0A1B0GSW2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28729A0A1B0GSW2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28729A0A1B0GSW2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28729A0A1B0GSW2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28729A0A1B0GSW2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.92■□□□□ 0.62
Gm28729A0A1B0GSW2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.92■□□□□ 0.62
Gm28729A0A1B0GSW2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28729A0A1B0GSW2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.92■□□□□ 0.62
Gm28729A0A1B0GSW2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28729A0A1B0GSW2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28729A0A1B0GSW2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28729A0A1B0GSW2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28729A0A1B0GSW2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28729A0A1B0GSW2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28729A0A1B0GSW2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28729A0A1B0GSW2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28729A0A1B0GSW2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.91■□□□□ 0.62
Gm28729A0A1B0GSW2 Gm6211-202ENSMUST00000167849 925 ntBASIC18.91■□□□□ 0.62
Gm28729A0A1B0GSW2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28729A0A1B0GSW2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28729A0A1B0GSW2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28729A0A1B0GSW2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28729A0A1B0GSW2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28729A0A1B0GSW2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28729A0A1B0GSW2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.9■□□□□ 0.62
Gm28729A0A1B0GSW2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.9■□□□□ 0.62
Gm28729A0A1B0GSW2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28729A0A1B0GSW2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.9■□□□□ 0.62
Gm28729A0A1B0GSW2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Gm28729A0A1B0GSW2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28729A0A1B0GSW2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28729A0A1B0GSW2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28729A0A1B0GSW2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Gm28729A0A1B0GSW2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28729A0A1B0GSW2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28729A0A1B0GSW2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Gm28729A0A1B0GSW2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Gm28729A0A1B0GSW2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28729A0A1B0GSW2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28729A0A1B0GSW2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28729A0A1B0GSW2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28729A0A1B0GSW2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28729A0A1B0GSW2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
Gm28729A0A1B0GSW2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28729A0A1B0GSW2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28729A0A1B0GSW2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28729A0A1B0GSW2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28729A0A1B0GSW2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Gm28729A0A1B0GSW2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28729A0A1B0GSW2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28729A0A1B0GSW2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.87■□□□□ 0.61
Gm28729A0A1B0GSW2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28729A0A1B0GSW2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28729A0A1B0GSW2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28729A0A1B0GSW2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gm28729A0A1B0GSW2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Gm28729A0A1B0GSW2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Gm28729A0A1B0GSW2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28729A0A1B0GSW2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28729A0A1B0GSW2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.86■□□□□ 0.61
Gm28729A0A1B0GSW2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28729A0A1B0GSW2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28729A0A1B0GSW2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gm28729A0A1B0GSW2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Gm28729A0A1B0GSW2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm28729A0A1B0GSW2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms