Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Gm6802-201ENSMUST00000167843 1983 ntBASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Igkv1-88A0A140T8N1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Gm7143-201ENSMUST00000222811 859 ntBASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Igkv1-88A0A140T8N1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv1-88A0A140T8N1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv1-88A0A140T8N1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Igkv1-88A0A140T8N1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv1-88A0A140T8N1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv1-88A0A140T8N1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv1-88A0A140T8N1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Igkv1-88A0A140T8N1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv1-88A0A140T8N1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv1-88A0A140T8N1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv1-88A0A140T8N1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Igkv1-88A0A140T8N1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Igkv1-88A0A140T8N1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Igkv1-88A0A140T8N1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Igkv1-88A0A140T8N1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Gm40881-201ENSMUST00000223397 166 ntBASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Igkv1-88A0A140T8N1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Igkv1-88A0A140T8N1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms