Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhgb8A0A140LI48 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhgb8A0A140LI48 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdhgb8A0A140LI48 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Gm45417-201ENSMUST00000209533 758 ntBASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb8A0A140LI48 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 Rarb-207ENSMUST00000225921 2756 ntBASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb8A0A140LI48 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb8A0A140LI48 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdhgb8A0A140LI48 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb8A0A140LI48 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb8A0A140LI48 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb8A0A140LI48 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb8A0A140LI48 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb8A0A140LI48 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb8A0A140LI48 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb8A0A140LI48 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb8A0A140LI48 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhgb8A0A140LI48 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb8A0A140LI48 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb8A0A140LI48 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhgb8A0A140LI48 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Pcdhgb8A0A140LI48 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhgb8A0A140LI48 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhgb8A0A140LI48 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms