Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Notumos-201ENSMUST00000151998 2659 ntBASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav9-4A0A0B4J1K2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-4A0A0B4J1K2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-4A0A0B4J1K2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-4A0A0B4J1K2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-4A0A0B4J1K2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-4A0A0B4J1K2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav9-4A0A0B4J1K2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav9-4A0A0B4J1K2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav9-4A0A0B4J1K2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav9-4A0A0B4J1K2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-4A0A0B4J1K2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav9-4A0A0B4J1K2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav9-4A0A0B4J1K2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav9-4A0A0B4J1K2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-4A0A0B4J1K2 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.45□□□□□ -0.1
Trav9-4A0A0B4J1K2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-4A0A0B4J1K2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-4A0A0B4J1K2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav9-4A0A0B4J1K2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav9-4A0A0B4J1K2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav9-4A0A0B4J1K2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Gm43060-201ENSMUST00000200621 289 ntBASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav9-4A0A0B4J1K2 Golph3-202ENSMUST00000226517 2359 ntBASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav9-4A0A0B4J1K2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav9-4A0A0B4J1K2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav9-4A0A0B4J1K2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms