Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Trbv5A0A0B4J1G9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trbv5A0A0B4J1G9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv5A0A0B4J1G9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trbv5A0A0B4J1G9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv5A0A0B4J1G9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv5A0A0B4J1G9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv5A0A0B4J1G9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv5A0A0B4J1G9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm14523-201ENSMUST00000117260 558 ntBASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv5A0A0B4J1G9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv5A0A0B4J1G9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv5A0A0B4J1G9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv5A0A0B4J1G9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv5A0A0B4J1G9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv5A0A0B4J1G9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv5A0A0B4J1G9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trbv5A0A0B4J1G9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trbv5A0A0B4J1G9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv5A0A0B4J1G9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trbv5A0A0B4J1G9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv5A0A0B4J1G9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv5A0A0B4J1G9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.47■□□□□ 0.07
Trbv5A0A0B4J1G9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trbv5A0A0B4J1G9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.47■□□□□ 0.07
Trbv5A0A0B4J1G9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv5A0A0B4J1G9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv5A0A0B4J1G9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv5A0A0B4J1G9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trbv5A0A0B4J1G9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv5A0A0B4J1G9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv5A0A0B4J1G9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms