Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sirpb1aA0A0A6YYP6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sirpb1aA0A0A6YYP6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.24■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Rps24-207ENSMUST00000224568 714 ntBASIC18.24■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.24■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sirpb1aA0A0A6YYP6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.22■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.21■□□□□ 0.51
Sirpb1aA0A0A6YYP6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sirpb1aA0A0A6YYP6 BC021767-201ENSMUST00000126387 1716 ntBASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sirpb1aA0A0A6YYP6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.18■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sirpb1aA0A0A6YYP6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms