Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv3A0A0A6YYE2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv3A0A0A6YYE2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv3A0A0A6YYE2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 AA386476-201ENSMUST00000098781 1665 ntBASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Gm10420-201ENSMUST00000121713 882 ntBASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Gm10399-202ENSMUST00000202768 748 ntBASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trbv3A0A0A6YYE2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv3A0A0A6YYE2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv3A0A0A6YYE2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv3A0A0A6YYE2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv3A0A0A6YYE2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.83□□□□□ -0.03
Trbv3A0A0A6YYE2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.83□□□□□ -0.04
Trbv3A0A0A6YYE2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv3A0A0A6YYE2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv3A0A0A6YYE2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv3A0A0A6YYE2 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.83□□□□□ -0.04
Trbv3A0A0A6YYE2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv3A0A0A6YYE2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv3A0A0A6YYE2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trbv3A0A0A6YYE2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv3A0A0A6YYE2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv3A0A0A6YYE2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trbv3A0A0A6YYE2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbv3A0A0A6YYE2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms