Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Gm27011-201ENSMUST00000182352 972 ntBASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm5075-201ENSMUST00000196916 622 ntBASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-42A0A0A6YY38 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm6420-201ENSMUST00000193885 723 ntBASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-42A0A0A6YY38 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-42A0A0A6YY38 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-42A0A0A6YY38 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.85■□□□□ 0.45
Ighv1-42A0A0A6YY38 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ighv1-42A0A0A6YY38 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.85■□□□□ 0.45
Ighv1-42A0A0A6YY38 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm6365-201ENSMUST00000054711 744 ntBASIC17.85■□□□□ 0.45
Ighv1-42A0A0A6YY38 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-42A0A0A6YY38 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ighv1-42A0A0A6YY38 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-42A0A0A6YY38 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Ighv1-42A0A0A6YY38 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-42A0A0A6YY38 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-42A0A0A6YY38 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-42A0A0A6YY38 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-42A0A0A6YY38 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ighv1-42A0A0A6YY38 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Ighv1-42A0A0A6YY38 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.84■□□□□ 0.45
Ighv1-42A0A0A6YY38 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ighv1-42A0A0A6YY38 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-42A0A0A6YY38 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-42A0A0A6YY38 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-42A0A0A6YY38 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-42A0A0A6YY38 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.84■□□□□ 0.45
Ighv1-42A0A0A6YY38 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Ighv1-42A0A0A6YY38 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Ighv1-42A0A0A6YY38 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-42A0A0A6YY38 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ighv1-42A0A0A6YY38 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.83■□□□□ 0.44
Ighv1-42A0A0A6YY38 Nespas-201ENSMUST00000143738 1083 ntBASIC17.83■□□□□ 0.44
Ighv1-42A0A0A6YY38 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.83■□□□□ 0.44
Ighv1-42A0A0A6YY38 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-42A0A0A6YY38 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-42A0A0A6YY38 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-42A0A0A6YY38 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-42A0A0A6YY38 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-42A0A0A6YY38 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
Ighv1-42A0A0A6YY38 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Gm12441-201ENSMUST00000121806 588 ntBASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-42A0A0A6YY38 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-42A0A0A6YY38 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-42A0A0A6YY38 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-42A0A0A6YY38 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-42A0A0A6YY38 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-42A0A0A6YY38 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.81■□□□□ 0.44
Ighv1-42A0A0A6YY38 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-42A0A0A6YY38 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-42A0A0A6YY38 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms