Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.87■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.85■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.85■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Gm10602-201ENSMUST00000098239 609 ntBASIC17.85■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ighv1-43A0A0A6YXN5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.84■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-43A0A0A6YXN5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-43A0A0A6YXN5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.83■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-43A0A0A6YXN5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.83■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Gm7860-201ENSMUST00000121190 879 ntBASIC17.83■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.83■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Ighv1-43A0A0A6YXN5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.82■□□□□ 0.44
Ighv1-43A0A0A6YXN5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.82■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Gm13534-201ENSMUST00000121169 513 ntBASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ighv1-43A0A0A6YXN5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.8■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-43A0A0A6YXN5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.78■□□□□ 0.44
Ighv1-43A0A0A6YXN5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms