Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Gm20049-201ENSMUST00000219950 730 ntBASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.07■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.06■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Gm13168-201ENSMUST00000121771 632 ntBASIC16.06■□□□□ 0.16
Ighv3-4A0A0A6YXF1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.06■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.06■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.03■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.03■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ighv3-4A0A0A6YXF1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.02■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv3-4A0A0A6YXF1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv3-4A0A0A6YXF1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.02■□□□□ 0.16
Ighv3-4A0A0A6YXF1 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.02■□□□□ 0.16
Ighv3-4A0A0A6YXF1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv3-4A0A0A6YXF1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.02■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.02■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm7860-201ENSMUST00000121190 879 ntBASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm10252-201ENSMUST00000209541 832 ntBASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ighv3-4A0A0A6YXF1 Gm37856-201ENSMUST00000191634 999 ntBASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms