Protein–RNA interactions for Protein: A0A0A6YW39

Ighv16-1, Immunoglobulin heavy variable 16-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv16-1A0A0A6YW39 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Ighv16-1A0A0A6YW39 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv16-1A0A0A6YW39 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Ighv16-1A0A0A6YW39 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv16-1A0A0A6YW39 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv16-1A0A0A6YW39 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.82■□□□□ 0.44
Ighv16-1A0A0A6YW39 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv16-1A0A0A6YW39 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv16-1A0A0A6YW39 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv16-1A0A0A6YW39 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
Ighv16-1A0A0A6YW39 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv16-1A0A0A6YW39 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.81■□□□□ 0.44
Ighv16-1A0A0A6YW39 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Ighv16-1A0A0A6YW39 Gm27801-201ENSMUST00000184174 223 ntBASIC17.81■□□□□ 0.44
Ighv16-1A0A0A6YW39 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv16-1A0A0A6YW39 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv16-1A0A0A6YW39 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv16-1A0A0A6YW39 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv16-1A0A0A6YW39 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv16-1A0A0A6YW39 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv16-1A0A0A6YW39 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv16-1A0A0A6YW39 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.8■□□□□ 0.44
Ighv16-1A0A0A6YW39 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.8■□□□□ 0.44
Ighv16-1A0A0A6YW39 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ighv16-1A0A0A6YW39 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv16-1A0A0A6YW39 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv16-1A0A0A6YW39 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv16-1A0A0A6YW39 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv16-1A0A0A6YW39 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv16-1A0A0A6YW39 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv16-1A0A0A6YW39 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Ighv16-1A0A0A6YW39 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ighv16-1A0A0A6YW39 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ighv16-1A0A0A6YW39 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv16-1A0A0A6YW39 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.78■□□□□ 0.44
Ighv16-1A0A0A6YW39 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.78■□□□□ 0.44
Ighv16-1A0A0A6YW39 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv16-1A0A0A6YW39 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ighv16-1A0A0A6YW39 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv16-1A0A0A6YW39 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv16-1A0A0A6YW39 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv16-1A0A0A6YW39 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv16-1A0A0A6YW39 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv16-1A0A0A6YW39 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv16-1A0A0A6YW39 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv16-1A0A0A6YW39 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ighv16-1A0A0A6YW39 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ighv16-1A0A0A6YW39 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.77■□□□□ 0.43
Ighv16-1A0A0A6YW39 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ighv16-1A0A0A6YW39 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv16-1A0A0A6YW39 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv16-1A0A0A6YW39 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv16-1A0A0A6YW39 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ighv16-1A0A0A6YW39 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv16-1A0A0A6YW39 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.76■□□□□ 0.43
Ighv16-1A0A0A6YW39 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv16-1A0A0A6YW39 Gm9988-201ENSMUST00000069786 435 ntBASIC17.76■□□□□ 0.43
Ighv16-1A0A0A6YW39 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ighv16-1A0A0A6YW39 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv16-1A0A0A6YW39 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv16-1A0A0A6YW39 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv16-1A0A0A6YW39 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv16-1A0A0A6YW39 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Gm18284-201ENSMUST00000172604 624 ntBASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Gm5874-201ENSMUST00000096101 508 ntBASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv16-1A0A0A6YW39 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv16-1A0A0A6YW39 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv16-1A0A0A6YW39 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ighv16-1A0A0A6YW39 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv16-1A0A0A6YW39 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.74■□□□□ 0.43
Ighv16-1A0A0A6YW39 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.74■□□□□ 0.43
Ighv16-1A0A0A6YW39 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Ighv16-1A0A0A6YW39 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.74■□□□□ 0.43
Ighv16-1A0A0A6YW39 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms