Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav3-4A0A075B654 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3-4A0A075B654 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3-4A0A075B654 Gm5784-201ENSMUST00000179344 2478 ntBASIC13□□□□□ -0.33
Trav3-4A0A075B654 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3-4A0A075B654 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3-4A0A075B654 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav3-4A0A075B654 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav3-4A0A075B654 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC13□□□□□ -0.33
Trav3-4A0A075B654 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav3-4A0A075B654 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3-4A0A075B654 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3-4A0A075B654 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3-4A0A075B654 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3-4A0A075B654 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav3-4A0A075B654 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav3-4A0A075B654 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav3-4A0A075B654 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trav3-4A0A075B654 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-4A0A075B654 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-4A0A075B654 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-4A0A075B654 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-4A0A075B654 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-4A0A075B654 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav3-4A0A075B654 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms