Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav5-4A0A075B652 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav5-4A0A075B652 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav5-4A0A075B652 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav5-4A0A075B652 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav5-4A0A075B652 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav5-4A0A075B652 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Trav5-4A0A075B652 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.02■□□□□ 0.16
Trav5-4A0A075B652 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
Trav5-4A0A075B652 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
Trav5-4A0A075B652 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav5-4A0A075B652 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.02■□□□□ 0.15
Trav5-4A0A075B652 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav5-4A0A075B652 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.02■□□□□ 0.15
Trav5-4A0A075B652 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav5-4A0A075B652 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav5-4A0A075B652 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.02■□□□□ 0.15
Trav5-4A0A075B652 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav5-4A0A075B652 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-4A0A075B652 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav5-4A0A075B652 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-4A0A075B652 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.01■□□□□ 0.15
Trav5-4A0A075B652 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.01■□□□□ 0.15
Trav5-4A0A075B652 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-4A0A075B652 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-4A0A075B652 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav5-4A0A075B652 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.01■□□□□ 0.15
Trav5-4A0A075B652 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav5-4A0A075B652 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16■□□□□ 0.15
Trav5-4A0A075B652 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Trav5-4A0A075B652 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Gm9847-201ENSMUST00000052528 599 ntBASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav5-4A0A075B652 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav5-4A0A075B652 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav5-4A0A075B652 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav5-4A0A075B652 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav5-4A0A075B652 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav5-4A0A075B652 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav5-4A0A075B652 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav5-4A0A075B652 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav5-4A0A075B652 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav5-4A0A075B652 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav5-4A0A075B652 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav5-4A0A075B652 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav5-4A0A075B652 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav5-4A0A075B652 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav5-4A0A075B652 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav5-4A0A075B652 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms