Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav13-1A0A075B644 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Gm10493-201ENSMUST00000097270 612 ntBASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav13-1A0A075B644 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav13-1A0A075B644 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav13-1A0A075B644 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav13-1A0A075B644 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav13-1A0A075B644 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms