Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8n-2A0A075B633 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.73■□□□□ 0.43
Trav8n-2A0A075B633 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8n-2A0A075B633 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8n-2A0A075B633 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8n-2A0A075B633 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.73■□□□□ 0.43
Trav8n-2A0A075B633 Gm10252-201ENSMUST00000209541 832 ntBASIC17.73■□□□□ 0.43
Trav8n-2A0A075B633 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8n-2A0A075B633 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Trav8n-2A0A075B633 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8n-2A0A075B633 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav8n-2A0A075B633 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Trav8n-2A0A075B633 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav8n-2A0A075B633 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav8n-2A0A075B633 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.72■□□□□ 0.43
Trav8n-2A0A075B633 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Trav8n-2A0A075B633 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trav8n-2A0A075B633 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.72■□□□□ 0.43
Trav8n-2A0A075B633 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.72■□□□□ 0.43
Trav8n-2A0A075B633 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav8n-2A0A075B633 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav8n-2A0A075B633 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.72■□□□□ 0.43
Trav8n-2A0A075B633 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav8n-2A0A075B633 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav8n-2A0A075B633 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav8n-2A0A075B633 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav8n-2A0A075B633 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav8n-2A0A075B633 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Trav8n-2A0A075B633 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.71■□□□□ 0.43
Trav8n-2A0A075B633 Gm37856-201ENSMUST00000191634 999 ntBASIC17.71■□□□□ 0.43
Trav8n-2A0A075B633 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav8n-2A0A075B633 Trmt13-210ENSMUST00000198454 880 ntBASIC17.71■□□□□ 0.43
Trav8n-2A0A075B633 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav8n-2A0A075B633 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trav8n-2A0A075B633 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav8n-2A0A075B633 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav8n-2A0A075B633 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav8n-2A0A075B633 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav8n-2A0A075B633 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Trav8n-2A0A075B633 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav8n-2A0A075B633 Gm7860-201ENSMUST00000121190 879 ntBASIC17.7■□□□□ 0.42
Trav8n-2A0A075B633 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav8n-2A0A075B633 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav8n-2A0A075B633 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav8n-2A0A075B633 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav8n-2A0A075B633 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav8n-2A0A075B633 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav8n-2A0A075B633 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Trav8n-2A0A075B633 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav8n-2A0A075B633 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav8n-2A0A075B633 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav8n-2A0A075B633 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trav8n-2A0A075B633 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Trav8n-2A0A075B633 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav8n-2A0A075B633 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav8n-2A0A075B633 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.68■□□□□ 0.42
Trav8n-2A0A075B633 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.68■□□□□ 0.42
Trav8n-2A0A075B633 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav8n-2A0A075B633 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav8n-2A0A075B633 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav8n-2A0A075B633 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav8n-2A0A075B633 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Gm26524-201ENSMUST00000192339 390 ntBASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Rab3c-203ENSMUST00000224180 967 ntBASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav8n-2A0A075B633 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav8n-2A0A075B633 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav8n-2A0A075B633 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.66■□□□□ 0.42
Trav8n-2A0A075B633 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav8n-2A0A075B633 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav8n-2A0A075B633 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav8n-2A0A075B633 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav8n-2A0A075B633 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav8n-2A0A075B633 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav8n-2A0A075B633 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav8n-2A0A075B633 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms