Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav10nA0A075B622 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav10nA0A075B622 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav10nA0A075B622 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav10nA0A075B622 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav10nA0A075B622 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trav10nA0A075B622 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav10nA0A075B622 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav10nA0A075B622 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Trav10nA0A075B622 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav10nA0A075B622 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav10nA0A075B622 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav10nA0A075B622 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav10nA0A075B622 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav10nA0A075B622 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav10nA0A075B622 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Trav10nA0A075B622 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav10nA0A075B622 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Trav10nA0A075B622 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav10nA0A075B622 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav10nA0A075B622 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav10nA0A075B622 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.08■□□□□ 0.32
Trav10nA0A075B622 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.08■□□□□ 0.32
Trav10nA0A075B622 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav10nA0A075B622 Gm43173-201ENSMUST00000202246 593 ntBASIC17.08■□□□□ 0.32
Trav10nA0A075B622 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav10nA0A075B622 Gm6139-201ENSMUST00000079261 882 ntBASIC17.08■□□□□ 0.32
Trav10nA0A075B622 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav10nA0A075B622 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.08■□□□□ 0.32
Trav10nA0A075B622 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav10nA0A075B622 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav10nA0A075B622 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav10nA0A075B622 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav10nA0A075B622 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav10nA0A075B622 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.07■□□□□ 0.32
Trav10nA0A075B622 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav10nA0A075B622 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav10nA0A075B622 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav10nA0A075B622 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav10nA0A075B622 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav10nA0A075B622 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav10nA0A075B622 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav10nA0A075B622 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav10nA0A075B622 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav10nA0A075B622 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav10nA0A075B622 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav10nA0A075B622 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav10nA0A075B622 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav10nA0A075B622 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.05■□□□□ 0.32
Trav10nA0A075B622 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav10nA0A075B622 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav10nA0A075B622 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.05■□□□□ 0.32
Trav10nA0A075B622 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav10nA0A075B622 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav10nA0A075B622 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav10nA0A075B622 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav10nA0A075B622 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav10nA0A075B622 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Smad6-203ENSMUST00000179458 273 ntBASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav10nA0A075B622 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trav10nA0A075B622 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Trav10nA0A075B622 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav10nA0A075B622 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav10nA0A075B622 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav10nA0A075B622 Gm43017-201ENSMUST00000198296 752 ntBASIC17.03■□□□□ 0.32
Trav10nA0A075B622 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav10nA0A075B622 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav10nA0A075B622 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav10nA0A075B622 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trav10nA0A075B622 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav10nA0A075B622 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav10nA0A075B622 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav10nA0A075B622 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav10nA0A075B622 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav10nA0A075B622 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav10nA0A075B622 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav10nA0A075B622 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav10nA0A075B622 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav10nA0A075B622 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav10nA0A075B622 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trav10nA0A075B622 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trav10nA0A075B622 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav10nA0A075B622 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav10nA0A075B622 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav10nA0A075B622 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav10nA0A075B622 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav10nA0A075B622 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav10nA0A075B622 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms