Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav16d-dv11A0A075B617 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav16d-dv11A0A075B617 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav16d-dv11A0A075B617 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16d-dv11A0A075B617 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16d-dv11A0A075B617 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav16d-dv11A0A075B617 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16d-dv11A0A075B617 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16d-dv11A0A075B617 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16d-dv11A0A075B617 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16d-dv11A0A075B617 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16d-dv11A0A075B617 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav16d-dv11A0A075B617 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16d-dv11A0A075B617 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav16d-dv11A0A075B617 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav16d-dv11A0A075B617 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav16d-dv11A0A075B617 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Gm14523-201ENSMUST00000117260 558 ntBASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav16d-dv11A0A075B617 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms