Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-1A0A075B606 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-1A0A075B606 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Trav13d-1A0A075B606 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav13d-1A0A075B606 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-1A0A075B606 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-1A0A075B606 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-1A0A075B606 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-1A0A075B606 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-1A0A075B606 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-1A0A075B606 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13d-1A0A075B606 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav13d-1A0A075B606 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.15
Trav13d-1A0A075B606 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav13d-1A0A075B606 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav13d-1A0A075B606 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-1A0A075B606 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Gm42569-201ENSMUST00000200539 472 ntBASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Gm42642-201ENSMUST00000200683 355 ntBASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-1A0A075B606 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav13d-1A0A075B606 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms