Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7n-5A0A075B604 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.83■□□□□ 0.12
Trav7n-5A0A075B604 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7n-5A0A075B604 Gm18284-201ENSMUST00000172604 624 ntBASIC15.83■□□□□ 0.12
Trav7n-5A0A075B604 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav7n-5A0A075B604 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.83■□□□□ 0.12
Trav7n-5A0A075B604 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7n-5A0A075B604 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav7n-5A0A075B604 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7n-5A0A075B604 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7n-5A0A075B604 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav7n-5A0A075B604 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7n-5A0A075B604 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav7n-5A0A075B604 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav7n-5A0A075B604 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7n-5A0A075B604 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7n-5A0A075B604 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7n-5A0A075B604 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7n-5A0A075B604 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.82■□□□□ 0.12
Trav7n-5A0A075B604 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7n-5A0A075B604 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7n-5A0A075B604 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav7n-5A0A075B604 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7n-5A0A075B604 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav7n-5A0A075B604 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7n-5A0A075B604 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7n-5A0A075B604 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7n-5A0A075B604 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7n-5A0A075B604 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav7n-5A0A075B604 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7n-5A0A075B604 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7n-5A0A075B604 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7n-5A0A075B604 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav7n-5A0A075B604 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav7n-5A0A075B604 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav7n-5A0A075B604 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7n-5A0A075B604 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav7n-5A0A075B604 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7n-5A0A075B604 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7n-5A0A075B604 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7n-5A0A075B604 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7n-5A0A075B604 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.8■□□□□ 0.12
Trav7n-5A0A075B604 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7n-5A0A075B604 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Trav7n-5A0A075B604 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7n-5A0A075B604 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.8■□□□□ 0.12
Trav7n-5A0A075B604 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7n-5A0A075B604 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav7n-5A0A075B604 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Gm8495-201ENSMUST00000188740 694 ntBASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Gm5874-201ENSMUST00000096101 508 ntBASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav7n-5A0A075B604 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav7n-5A0A075B604 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7n-5A0A075B604 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trav7n-5A0A075B604 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7n-5A0A075B604 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7n-5A0A075B604 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7n-5A0A075B604 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7n-5A0A075B604 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7n-5A0A075B604 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.77■□□□□ 0.12
Trav7n-5A0A075B604 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav7n-5A0A075B604 Gm9988-201ENSMUST00000069786 435 ntBASIC15.77■□□□□ 0.12
Trav7n-5A0A075B604 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav7n-5A0A075B604 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7n-5A0A075B604 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav7n-5A0A075B604 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav7n-5A0A075B604 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms