Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Gm17980-201ENSMUST00000217977 2349 ntBASIC9.35□□□□□ -0.91
Pknox1O70477 CT025603.1-201ENSMUST00000224040 448 ntBASIC9.35□□□□□ -0.91
Pknox1O70477 AC116797.2-203ENSMUST00000225290 565 ntBASIC9.35□□□□□ -0.91
Pknox1O70477 AC163646.3-202ENSMUST00000228685 691 ntBASIC9.35□□□□□ -0.91
Pknox1O70477 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Krt222-201ENSMUST00000038214 2042 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Eif3g-201ENSMUST00000004206 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 AI182371-201ENSMUST00000045776 1724 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Lkaaear1-201ENSMUST00000052416 718 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Tmem216-202ENSMUST00000059582 999 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC9.35□□□□□ -0.91
Pknox1O70477 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Acsl6-207ENSMUST00000101213 2730 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Ehmt1-204ENSMUST00000114418 4902 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Pknox1O70477 Apol11b-202ENSMUST00000180949 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Slc2a9-202ENSMUST00000067872 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Gng7-202ENSMUST00000099462 3425 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 Gm42822-201ENSMUST00000200507 1529 ntBASIC9.35□□□□□ -0.91
Pknox1O70477 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Pknox1O70477 Dach2-205ENSMUST00000113382 5155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Pknox1O70477 AC155270.1-201ENSMUST00000221626 4028 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 5031434C07Rik-201ENSMUST00000053559 2894 ntTSL 5 BASIC9.34□□□□□ -0.91
Pknox1O70477 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Pknox1O70477 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC9.34□□□□□ -0.91
Pknox1O70477 Nup98-204ENSMUST00000211005 3961 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Trim36-201ENSMUST00000037011 4544 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Swt1-201ENSMUST00000064771 3688 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC9.34□□□□□ -0.91
Pknox1O70477 Inpp5k-201ENSMUST00000006286 2679 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Gm4915-201ENSMUST00000121909 1569 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 Mtmr6-203ENSMUST00000224366 1968 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
Pknox1O70477 Gm44547-201ENSMUST00000207793 1446 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 Msl3-201ENSMUST00000033725 2399 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Pknox1O70477 Tprkb-205ENSMUST00000113753 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Nr2e1-202ENSMUST00000105498 780 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Cks1b-202ENSMUST00000107422 766 ntTSL 2 BASIC9.34□□□□□ -0.91
Pknox1O70477 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC9.34□□□□□ -0.91
Pknox1O70477 Hmox2-203ENSMUST00000120232 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Rpl7a-ps13-201ENSMUST00000121692 563 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 Gm14439-201ENSMUST00000122320 441 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC9.34□□□□□ -0.91
Pknox1O70477 Rspo4os-201ENSMUST00000152229 1281 ntTSL 5 BASIC9.34□□□□□ -0.91
Pknox1O70477 Rgs5-202ENSMUST00000152809 723 ntTSL 2 BASIC9.34□□□□□ -0.91
Pknox1O70477 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC9.34□□□□□ -0.91
Pknox1O70477 Olfr93-201ENSMUST00000171679 1045 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Pknox1O70477 Rcan2-203ENSMUST00000177857 984 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Gm24269-201ENSMUST00000179216 77 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 Gm21963-201ENSMUST00000179519 330 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 Gm5652-201ENSMUST00000182336 1008 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 Gm8707-201ENSMUST00000183325 980 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 Mir7088-201ENSMUST00000184227 86 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 Gm37804-201ENSMUST00000192206 547 ntTSL 5 BASIC9.34□□□□□ -0.91
Pknox1O70477 4930500F04Rik-203ENSMUST00000202177 576 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC9.34□□□□□ -0.91
Pknox1O70477 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Pknox1O70477 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC9.34□□□□□ -0.91
Pknox1O70477 AC159813.2-201ENSMUST00000221516 797 ntTSL 5 BASIC9.34□□□□□ -0.91
Pknox1O70477 Gm40438-201ENSMUST00000221650 1061 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 AC093022.2-202ENSMUST00000227500 866 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Pknox1O70477 Rps3a3-201ENSMUST00000074680 795 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 1700019C18Rik-203ENSMUST00000222085 1766 ntTSL 5 BASIC9.34□□□□□ -0.91
Pknox1O70477 Gm45286-201ENSMUST00000209267 1350 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Ndufs1-201ENSMUST00000027111 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Bmf-201ENSMUST00000090219 4642 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Chil1-208ENSMUST00000156873 1645 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Pknox1O70477 Zfp185-203ENSMUST00000164800 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 9630001P10Rik-202ENSMUST00000181335 3006 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Pknox1O70477 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Pknox1O70477 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 Gm7001-201ENSMUST00000219384 1465 ntBASIC9.34□□□□□ -0.91
Pknox1O70477 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Pknox1O70477 Kif1a-204ENSMUST00000171796 8206 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Pknox1O70477 Pnisr-203ENSMUST00000108229 2922 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Pknox1O70477 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Pknox1O70477 AA986860-201ENSMUST00000039323 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Pknox1O70477 Polr3k-201ENSMUST00000039551 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Pknox1O70477 Gm43014-201ENSMUST00000198568 2443 ntBASIC9.33□□□□□ -0.92
Pknox1O70477 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Pknox1O70477 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Pknox1O70477 Gucy2d-201ENSMUST00000098274 3537 ntTSL 5 BASIC9.33□□□□□ -0.92
Pknox1O70477 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Pknox1O70477 Gm38336-201ENSMUST00000193040 2549 ntBASIC9.33□□□□□ -0.92
Pknox1O70477 Gucy2d-203ENSMUST00000206435 3634 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Pknox1O70477 Ube2d3-201ENSMUST00000106291 1512 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Pknox1O70477 Helb-201ENSMUST00000020449 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Pknox1O70477 Ipo11-202ENSMUST00000080856 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Pknox1O70477 Tex48-202ENSMUST00000102862 672 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Pknox1O70477 Spata32-201ENSMUST00000103076 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Pknox1O70477 Gm22777-201ENSMUST00000104091 129 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 115.3 ms