Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.79□□□□□ -0.04
PdfS4R2K0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.79□□□□□ -0.04
PdfS4R2K0 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.79□□□□□ -0.04
PdfS4R2K0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PdfS4R2K0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PdfS4R2K0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdfS4R2K0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.78□□□□□ -0.04
PdfS4R2K0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdfS4R2K0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdfS4R2K0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdfS4R2K0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdfS4R2K0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.78□□□□□ -0.04
PdfS4R2K0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.78□□□□□ -0.04
PdfS4R2K0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
PdfS4R2K0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdfS4R2K0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdfS4R2K0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PdfS4R2K0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdfS4R2K0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdfS4R2K0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PdfS4R2K0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdfS4R2K0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PdfS4R2K0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PdfS4R2K0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PdfS4R2K0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
PdfS4R2K0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
PdfS4R2K0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
PdfS4R2K0 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.77□□□□□ -0.05
PdfS4R2K0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.77□□□□□ -0.05
PdfS4R2K0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
PdfS4R2K0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PdfS4R2K0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PdfS4R2K0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PdfS4R2K0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PdfS4R2K0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.77□□□□□ -0.05
PdfS4R2K0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdfS4R2K0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdfS4R2K0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.76□□□□□ -0.05
PdfS4R2K0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdfS4R2K0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
PdfS4R2K0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.76□□□□□ -0.05
PdfS4R2K0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdfS4R2K0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdfS4R2K0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdfS4R2K0 Rarb-207ENSMUST00000225921 2756 ntBASIC14.76□□□□□ -0.05
PdfS4R2K0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdfS4R2K0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdfS4R2K0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PdfS4R2K0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdfS4R2K0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdfS4R2K0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdfS4R2K0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdfS4R2K0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdfS4R2K0 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.75□□□□□ -0.05
PdfS4R2K0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PdfS4R2K0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdfS4R2K0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.74□□□□□ -0.05
PdfS4R2K0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PdfS4R2K0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.74□□□□□ -0.05
PdfS4R2K0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PdfS4R2K0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.74□□□□□ -0.05
PdfS4R2K0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdfS4R2K0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdfS4R2K0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.73□□□□□ -0.05
PdfS4R2K0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PdfS4R2K0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdfS4R2K0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdfS4R2K0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PdfS4R2K0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PdfS4R2K0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.73□□□□□ -0.05
PdfS4R2K0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdfS4R2K0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdfS4R2K0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdfS4R2K0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdfS4R2K0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PdfS4R2K0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdfS4R2K0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PdfS4R2K0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.73□□□□□ -0.05
PdfS4R2K0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms