Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl40Q9Z2Q5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Gm42569-201ENSMUST00000200539 472 ntBASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.24■□□□□ 0.67
Mrpl40Q9Z2Q5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl40Q9Z2Q5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl40Q9Z2Q5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl40Q9Z2Q5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl40Q9Z2Q5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl40Q9Z2Q5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl40Q9Z2Q5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl40Q9Z2Q5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl40Q9Z2Q5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl40Q9Z2Q5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrpl40Q9Z2Q5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Gm42642-201ENSMUST00000200683 355 ntBASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mrpl40Q9Z2Q5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrpl40Q9Z2Q5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrpl40Q9Z2Q5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mrpl40Q9Z2Q5 Gm26571-201ENSMUST00000181399 666 ntBASIC19.21■□□□□ 0.67
Mrpl40Q9Z2Q5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mrpl40Q9Z2Q5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrpl40Q9Z2Q5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Mrpl40Q9Z2Q5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Mrpl40Q9Z2Q5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrpl40Q9Z2Q5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Mrpl40Q9Z2Q5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrpl40Q9Z2Q5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.2■□□□□ 0.66
Mrpl40Q9Z2Q5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mrpl40Q9Z2Q5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrpl40Q9Z2Q5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Mrpl40Q9Z2Q5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.2■□□□□ 0.66
Mrpl40Q9Z2Q5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrpl40Q9Z2Q5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Mrpl40Q9Z2Q5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 Gm7291-201ENSMUST00000199147 382 ntBASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrpl40Q9Z2Q5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mrpl40Q9Z2Q5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Mrpl40Q9Z2Q5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mrpl40Q9Z2Q5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.18■□□□□ 0.66
Mrpl40Q9Z2Q5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Mrpl40Q9Z2Q5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Mrpl40Q9Z2Q5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Mrpl40Q9Z2Q5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mrpl40Q9Z2Q5 Gm11421-201ENSMUST00000122124 294 ntBASIC19.17■□□□□ 0.66
Mrpl40Q9Z2Q5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms