Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Smarcb1Q9Z0H3 Gm38205-201ENSMUST00000192243 258 ntBASIC20.16■□□□□ 0.82
Smarcb1Q9Z0H3 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.16■□□□□ 0.82
Smarcb1Q9Z0H3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.16■□□□□ 0.82
Smarcb1Q9Z0H3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcb1Q9Z0H3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Smarcb1Q9Z0H3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smarcb1Q9Z0H3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Smarcb1Q9Z0H3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Smarcb1Q9Z0H3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcb1Q9Z0H3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcb1Q9Z0H3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Smarcb1Q9Z0H3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.15■□□□□ 0.82
Smarcb1Q9Z0H3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcb1Q9Z0H3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcb1Q9Z0H3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smarcb1Q9Z0H3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcb1Q9Z0H3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcb1Q9Z0H3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcb1Q9Z0H3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcb1Q9Z0H3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smarcb1Q9Z0H3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Smarcb1Q9Z0H3 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.14■□□□□ 0.81
Smarcb1Q9Z0H3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 Gm10602-201ENSMUST00000098239 609 ntBASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smarcb1Q9Z0H3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcb1Q9Z0H3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcb1Q9Z0H3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.12■□□□□ 0.81
Smarcb1Q9Z0H3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.12■□□□□ 0.81
Smarcb1Q9Z0H3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcb1Q9Z0H3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Smarcb1Q9Z0H3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Smarcb1Q9Z0H3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Smarcb1Q9Z0H3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smarcb1Q9Z0H3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcb1Q9Z0H3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcb1Q9Z0H3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Smarcb1Q9Z0H3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcb1Q9Z0H3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcb1Q9Z0H3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Smarcb1Q9Z0H3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smarcb1Q9Z0H3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Smarcb1Q9Z0H3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcb1Q9Z0H3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcb1Q9Z0H3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcb1Q9Z0H3 Gm13534-201ENSMUST00000121169 513 ntBASIC20.1■□□□□ 0.81
Smarcb1Q9Z0H3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Smarcb1Q9Z0H3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcb1Q9Z0H3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcb1Q9Z0H3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Smarcb1Q9Z0H3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smarcb1Q9Z0H3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcb1Q9Z0H3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcb1Q9Z0H3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcb1Q9Z0H3 Gm7860-201ENSMUST00000121190 879 ntBASIC20.09■□□□□ 0.81
Smarcb1Q9Z0H3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Smarcb1Q9Z0H3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.09■□□□□ 0.81
Smarcb1Q9Z0H3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smarcb1Q9Z0H3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Smarcb1Q9Z0H3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.09■□□□□ 0.81
Smarcb1Q9Z0H3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smarcb1Q9Z0H3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smarcb1Q9Z0H3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Smarcb1Q9Z0H3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Smarcb1Q9Z0H3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.08■□□□□ 0.81
Smarcb1Q9Z0H3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Smarcb1Q9Z0H3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smarcb1Q9Z0H3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smarcb1Q9Z0H3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcb1Q9Z0H3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcb1Q9Z0H3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Smarcb1Q9Z0H3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Smarcb1Q9Z0H3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.07■□□□□ 0.8
Smarcb1Q9Z0H3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcb1Q9Z0H3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcb1Q9Z0H3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smarcb1Q9Z0H3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smarcb1Q9Z0H3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms