Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col13a1Q9R1N9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col13a1Q9R1N9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col13a1Q9R1N9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col13a1Q9R1N9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col13a1Q9R1N9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col13a1Q9R1N9 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.42■□□□□ 0.22
Col13a1Q9R1N9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col13a1Q9R1N9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col13a1Q9R1N9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col13a1Q9R1N9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col13a1Q9R1N9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col13a1Q9R1N9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.41■□□□□ 0.22
Col13a1Q9R1N9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col13a1Q9R1N9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col13a1Q9R1N9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Col13a1Q9R1N9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col13a1Q9R1N9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col13a1Q9R1N9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col13a1Q9R1N9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col13a1Q9R1N9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.39■□□□□ 0.21
Col13a1Q9R1N9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Gm13148-201ENSMUST00000118892 745 ntBASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col13a1Q9R1N9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 Gm20049-201ENSMUST00000219950 730 ntBASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col13a1Q9R1N9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col13a1Q9R1N9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col13a1Q9R1N9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col13a1Q9R1N9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col13a1Q9R1N9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col13a1Q9R1N9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms