Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx5Q9JL61 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx5Q9JL61 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx5Q9JL61 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.56■□□□□ 0.88
Rfx5Q9JL61 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Rfx5Q9JL61 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.56■□□□□ 0.88
Rfx5Q9JL61 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.56■□□□□ 0.88
Rfx5Q9JL61 Gm10493-201ENSMUST00000097270 612 ntBASIC20.56■□□□□ 0.88
Rfx5Q9JL61 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx5Q9JL61 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx5Q9JL61 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx5Q9JL61 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx5Q9JL61 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx5Q9JL61 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Rfx5Q9JL61 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx5Q9JL61 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx5Q9JL61 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rfx5Q9JL61 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rfx5Q9JL61 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx5Q9JL61 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.55■□□□□ 0.88
Rfx5Q9JL61 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx5Q9JL61 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx5Q9JL61 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx5Q9JL61 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx5Q9JL61 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx5Q9JL61 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx5Q9JL61 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.54■□□□□ 0.88
Rfx5Q9JL61 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx5Q9JL61 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx5Q9JL61 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rfx5Q9JL61 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx5Q9JL61 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx5Q9JL61 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rfx5Q9JL61 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rfx5Q9JL61 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rfx5Q9JL61 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx5Q9JL61 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
Rfx5Q9JL61 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx5Q9JL61 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rfx5Q9JL61 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.52■□□□□ 0.88
Rfx5Q9JL61 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.52■□□□□ 0.87
Rfx5Q9JL61 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rfx5Q9JL61 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.51■□□□□ 0.87
Rfx5Q9JL61 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx5Q9JL61 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rfx5Q9JL61 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Rfx5Q9JL61 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx5Q9JL61 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.51■□□□□ 0.87
Rfx5Q9JL61 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.51■□□□□ 0.87
Rfx5Q9JL61 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx5Q9JL61 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx5Q9JL61 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx5Q9JL61 Golph3-202ENSMUST00000226517 2359 ntBASIC20.51■□□□□ 0.87
Rfx5Q9JL61 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rfx5Q9JL61 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx5Q9JL61 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx5Q9JL61 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx5Q9JL61 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Rfx5Q9JL61 Gm5874-201ENSMUST00000096101 508 ntBASIC20.5■□□□□ 0.87
Rfx5Q9JL61 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx5Q9JL61 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rfx5Q9JL61 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rfx5Q9JL61 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rfx5Q9JL61 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx5Q9JL61 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx5Q9JL61 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx5Q9JL61 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx5Q9JL61 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx5Q9JL61 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.49■□□□□ 0.87
Rfx5Q9JL61 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx5Q9JL61 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.49■□□□□ 0.87
Rfx5Q9JL61 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.49■□□□□ 0.87
Rfx5Q9JL61 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx5Q9JL61 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx5Q9JL61 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx5Q9JL61 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx5Q9JL61 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rfx5Q9JL61 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.49■□□□□ 0.87
Rfx5Q9JL61 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rfx5Q9JL61 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx5Q9JL61 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.48■□□□□ 0.87
Rfx5Q9JL61 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rfx5Q9JL61 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx5Q9JL61 Gm8495-201ENSMUST00000188740 694 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms