Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scn5aQ9JJV9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn5aQ9JJV9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.24■□□□□ 0.83
Scn5aQ9JJV9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.24■□□□□ 0.83
Scn5aQ9JJV9 Trmt13-210ENSMUST00000198454 880 ntBASIC20.24■□□□□ 0.83
Scn5aQ9JJV9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn5aQ9JJV9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
Scn5aQ9JJV9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn5aQ9JJV9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.24■□□□□ 0.83
Scn5aQ9JJV9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn5aQ9JJV9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Scn5aQ9JJV9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scn5aQ9JJV9 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.24■□□□□ 0.83
Scn5aQ9JJV9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn5aQ9JJV9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Scn5aQ9JJV9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn5aQ9JJV9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn5aQ9JJV9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn5aQ9JJV9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn5aQ9JJV9 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.23■□□□□ 0.83
Scn5aQ9JJV9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn5aQ9JJV9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn5aQ9JJV9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Gm8520-201ENSMUST00000186517 868 ntBASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.22■□□□□ 0.83
Scn5aQ9JJV9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.21■□□□□ 0.83
Scn5aQ9JJV9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn5aQ9JJV9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn5aQ9JJV9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn5aQ9JJV9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn5aQ9JJV9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn5aQ9JJV9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn5aQ9JJV9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn5aQ9JJV9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn5aQ9JJV9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn5aQ9JJV9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn5aQ9JJV9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn5aQ9JJV9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn5aQ9JJV9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Scn5aQ9JJV9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Scn5aQ9JJV9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scn5aQ9JJV9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn5aQ9JJV9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.2■□□□□ 0.82
Scn5aQ9JJV9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn5aQ9JJV9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scn5aQ9JJV9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Scn5aQ9JJV9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scn5aQ9JJV9 Gm7860-201ENSMUST00000121190 879 ntBASIC20.19■□□□□ 0.82
Scn5aQ9JJV9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn5aQ9JJV9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Scn5aQ9JJV9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.19■□□□□ 0.82
Scn5aQ9JJV9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Scn5aQ9JJV9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn5aQ9JJV9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Scn5aQ9JJV9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Scn5aQ9JJV9 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.19■□□□□ 0.82
Scn5aQ9JJV9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Scn5aQ9JJV9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scn5aQ9JJV9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.18■□□□□ 0.82
Scn5aQ9JJV9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn5aQ9JJV9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Scn5aQ9JJV9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Scn5aQ9JJV9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Scn5aQ9JJV9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Gm10812-201ENSMUST00000099864 546 ntBASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Scn5aQ9JJV9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Scn5aQ9JJV9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scn5aQ9JJV9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.16■□□□□ 0.82
Scn5aQ9JJV9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.16■□□□□ 0.82
Scn5aQ9JJV9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms