Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim39Q9ESN2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim39Q9ESN2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.97■□□□□ 0.47
Trim39Q9ESN2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.97■□□□□ 0.47
Trim39Q9ESN2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trim39Q9ESN2 Golgb1-201ENSMUST00000023534 498 ntBASIC17.97■□□□□ 0.47
Trim39Q9ESN2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim39Q9ESN2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim39Q9ESN2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim39Q9ESN2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim39Q9ESN2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Trim39Q9ESN2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trim39Q9ESN2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim39Q9ESN2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim39Q9ESN2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim39Q9ESN2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim39Q9ESN2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim39Q9ESN2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim39Q9ESN2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim39Q9ESN2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim39Q9ESN2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim39Q9ESN2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.96■□□□□ 0.47
Trim39Q9ESN2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim39Q9ESN2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim39Q9ESN2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim39Q9ESN2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim39Q9ESN2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim39Q9ESN2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim39Q9ESN2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim39Q9ESN2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim39Q9ESN2 Gm12922-201ENSMUST00000120626 809 ntBASIC17.95■□□□□ 0.46
Trim39Q9ESN2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.95■□□□□ 0.46
Trim39Q9ESN2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim39Q9ESN2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trim39Q9ESN2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim39Q9ESN2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim39Q9ESN2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim39Q9ESN2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim39Q9ESN2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim39Q9ESN2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim39Q9ESN2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim39Q9ESN2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim39Q9ESN2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Mir6236-201ENSMUST00000184437 123 ntBASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim39Q9ESN2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Trim39Q9ESN2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim39Q9ESN2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim39Q9ESN2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim39Q9ESN2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim39Q9ESN2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim39Q9ESN2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim39Q9ESN2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim39Q9ESN2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim39Q9ESN2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim39Q9ESN2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim39Q9ESN2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim39Q9ESN2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim39Q9ESN2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim39Q9ESN2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim39Q9ESN2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim39Q9ESN2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim39Q9ESN2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim39Q9ESN2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim39Q9ESN2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim39Q9ESN2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim39Q9ESN2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim39Q9ESN2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim39Q9ESN2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim39Q9ESN2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim39Q9ESN2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim39Q9ESN2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim39Q9ESN2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim39Q9ESN2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 124.3 ms