Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.59■□□□□ 0.89
Rtn3Q9ES97 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn3Q9ES97 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn3Q9ES97 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn3Q9ES97 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.58■□□□□ 0.89
Rtn3Q9ES97 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.58■□□□□ 0.89
Rtn3Q9ES97 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.58■□□□□ 0.89
Rtn3Q9ES97 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.58■□□□□ 0.89
Rtn3Q9ES97 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Rtn3Q9ES97 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.58■□□□□ 0.88
Rtn3Q9ES97 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Rtn3Q9ES97 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtn3Q9ES97 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtn3Q9ES97 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtn3Q9ES97 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtn3Q9ES97 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn3Q9ES97 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn3Q9ES97 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn3Q9ES97 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn3Q9ES97 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Rtn3Q9ES97 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.57■□□□□ 0.88
Rtn3Q9ES97 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn3Q9ES97 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Rtn3Q9ES97 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rtn3Q9ES97 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn3Q9ES97 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rtn3Q9ES97 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn3Q9ES97 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.56■□□□□ 0.88
Rtn3Q9ES97 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.56■□□□□ 0.88
Rtn3Q9ES97 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn3Q9ES97 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn3Q9ES97 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.55■□□□□ 0.88
Rtn3Q9ES97 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn3Q9ES97 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Rtn3Q9ES97 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn3Q9ES97 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rtn3Q9ES97 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.55■□□□□ 0.88
Rtn3Q9ES97 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn3Q9ES97 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rtn3Q9ES97 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn3Q9ES97 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn3Q9ES97 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
Rtn3Q9ES97 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.54■□□□□ 0.88
Rtn3Q9ES97 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.54■□□□□ 0.88
Rtn3Q9ES97 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn3Q9ES97 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Rtn3Q9ES97 Gm43017-201ENSMUST00000198296 752 ntBASIC20.54■□□□□ 0.88
Rtn3Q9ES97 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn3Q9ES97 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn3Q9ES97 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn3Q9ES97 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn3Q9ES97 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn3Q9ES97 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn3Q9ES97 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.53■□□□□ 0.88
Rtn3Q9ES97 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn3Q9ES97 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Rtn3Q9ES97 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn3Q9ES97 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn3Q9ES97 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn3Q9ES97 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn3Q9ES97 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn3Q9ES97 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn3Q9ES97 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.52■□□□□ 0.88
Rtn3Q9ES97 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn3Q9ES97 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rtn3Q9ES97 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn3Q9ES97 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn3Q9ES97 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn3Q9ES97 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.5■□□□□ 0.87
Rtn3Q9ES97 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn3Q9ES97 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn3Q9ES97 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn3Q9ES97 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.5■□□□□ 0.87
Rtn3Q9ES97 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn3Q9ES97 Spcs1-204ENSMUST00000226782 949 ntBASIC20.5■□□□□ 0.87
Rtn3Q9ES97 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn3Q9ES97 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn3Q9ES97 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn3Q9ES97 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn3Q9ES97 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.49■□□□□ 0.87
Rtn3Q9ES97 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn3Q9ES97 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn3Q9ES97 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rtn3Q9ES97 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms