Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Hmgn3Q9DCB1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn3Q9DCB1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn3Q9DCB1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn3Q9DCB1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn3Q9DCB1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn3Q9DCB1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn3Q9DCB1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hmgn3Q9DCB1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn3Q9DCB1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn3Q9DCB1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn3Q9DCB1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn3Q9DCB1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn3Q9DCB1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn3Q9DCB1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hmgn3Q9DCB1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Hmgn3Q9DCB1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hmgn3Q9DCB1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hmgn3Q9DCB1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hmgn3Q9DCB1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hmgn3Q9DCB1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hmgn3Q9DCB1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmgn3Q9DCB1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hmgn3Q9DCB1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Hmgn3Q9DCB1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms