Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssmem1Q9D9Y8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssmem1Q9D9Y8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssmem1Q9D9Y8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ssmem1Q9D9Y8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssmem1Q9D9Y8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.73■□□□□ 0.27
Ssmem1Q9D9Y8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Ssmem1Q9D9Y8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssmem1Q9D9Y8 Gm5874-201ENSMUST00000096101 508 ntBASIC16.73■□□□□ 0.27
Ssmem1Q9D9Y8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssmem1Q9D9Y8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ssmem1Q9D9Y8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ssmem1Q9D9Y8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Ssmem1Q9D9Y8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssmem1Q9D9Y8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.72■□□□□ 0.27
Ssmem1Q9D9Y8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssmem1Q9D9Y8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ssmem1Q9D9Y8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.72■□□□□ 0.27
Ssmem1Q9D9Y8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ssmem1Q9D9Y8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ssmem1Q9D9Y8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssmem1Q9D9Y8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ssmem1Q9D9Y8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssmem1Q9D9Y8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssmem1Q9D9Y8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.72■□□□□ 0.27
Ssmem1Q9D9Y8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssmem1Q9D9Y8 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.71■□□□□ 0.27
Ssmem1Q9D9Y8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssmem1Q9D9Y8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssmem1Q9D9Y8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssmem1Q9D9Y8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssmem1Q9D9Y8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ssmem1Q9D9Y8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssmem1Q9D9Y8 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.71■□□□□ 0.27
Ssmem1Q9D9Y8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Ssmem1Q9D9Y8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssmem1Q9D9Y8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssmem1Q9D9Y8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ssmem1Q9D9Y8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ssmem1Q9D9Y8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssmem1Q9D9Y8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.69■□□□□ 0.26
Ssmem1Q9D9Y8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Ssmem1Q9D9Y8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ssmem1Q9D9Y8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.69■□□□□ 0.26
Ssmem1Q9D9Y8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssmem1Q9D9Y8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.69■□□□□ 0.26
Ssmem1Q9D9Y8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ssmem1Q9D9Y8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssmem1Q9D9Y8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ssmem1Q9D9Y8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Ssmem1Q9D9Y8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssmem1Q9D9Y8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssmem1Q9D9Y8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ssmem1Q9D9Y8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssmem1Q9D9Y8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ssmem1Q9D9Y8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssmem1Q9D9Y8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssmem1Q9D9Y8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssmem1Q9D9Y8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssmem1Q9D9Y8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ssmem1Q9D9Y8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ssmem1Q9D9Y8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ssmem1Q9D9Y8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssmem1Q9D9Y8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ssmem1Q9D9Y8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssmem1Q9D9Y8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.67■□□□□ 0.26
Ssmem1Q9D9Y8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ssmem1Q9D9Y8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ssmem1Q9D9Y8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssmem1Q9D9Y8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssmem1Q9D9Y8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
Ssmem1Q9D9Y8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssmem1Q9D9Y8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssmem1Q9D9Y8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ssmem1Q9D9Y8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms