Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hcfc2Q9D968 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hcfc2Q9D968 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hcfc2Q9D968 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hcfc2Q9D968 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.69□□□□□ -0.06
Hcfc2Q9D968 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hcfc2Q9D968 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hcfc2Q9D968 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hcfc2Q9D968 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hcfc2Q9D968 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hcfc2Q9D968 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hcfc2Q9D968 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hcfc2Q9D968 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hcfc2Q9D968 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Hcfc2Q9D968 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hcfc2Q9D968 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hcfc2Q9D968 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hcfc2Q9D968 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Hcfc2Q9D968 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Hcfc2Q9D968 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hcfc2Q9D968 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hcfc2Q9D968 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hcfc2Q9D968 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Hcfc2Q9D968 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hcfc2Q9D968 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms