Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tmem54Q9D7S1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Tmem54Q9D7S1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.99■□□□□ 0.31
Tmem54Q9D7S1 Gm27801-201ENSMUST00000184174 223 ntBASIC16.99■□□□□ 0.31
Tmem54Q9D7S1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.99■□□□□ 0.31
Tmem54Q9D7S1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Tmem54Q9D7S1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tmem54Q9D7S1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tmem54Q9D7S1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tmem54Q9D7S1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.98■□□□□ 0.31
Tmem54Q9D7S1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tmem54Q9D7S1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.98■□□□□ 0.31
Tmem54Q9D7S1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.98■□□□□ 0.31
Tmem54Q9D7S1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tmem54Q9D7S1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tmem54Q9D7S1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tmem54Q9D7S1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tmem54Q9D7S1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Tmem54Q9D7S1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tmem54Q9D7S1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tmem54Q9D7S1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tmem54Q9D7S1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tmem54Q9D7S1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.96■□□□□ 0.31
Tmem54Q9D7S1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tmem54Q9D7S1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tmem54Q9D7S1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tmem54Q9D7S1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tmem54Q9D7S1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Tmem54Q9D7S1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tmem54Q9D7S1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Tmem54Q9D7S1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Tmem54Q9D7S1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Tmem54Q9D7S1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Tmem54Q9D7S1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Tmem54Q9D7S1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Tmem54Q9D7S1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Tmem54Q9D7S1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tmem54Q9D7S1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tmem54Q9D7S1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tmem54Q9D7S1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Tmem54Q9D7S1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Tmem54Q9D7S1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tmem54Q9D7S1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tmem54Q9D7S1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tmem54Q9D7S1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
Tmem54Q9D7S1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tmem54Q9D7S1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tmem54Q9D7S1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tmem54Q9D7S1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tmem54Q9D7S1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Tmem54Q9D7S1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tmem54Q9D7S1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tmem54Q9D7S1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.93■□□□□ 0.3
Tmem54Q9D7S1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tmem54Q9D7S1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.93■□□□□ 0.3
Tmem54Q9D7S1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tmem54Q9D7S1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tmem54Q9D7S1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tmem54Q9D7S1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.92■□□□□ 0.3
Tmem54Q9D7S1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tmem54Q9D7S1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Tmem54Q9D7S1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.92■□□□□ 0.3
Tmem54Q9D7S1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tmem54Q9D7S1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Tmem54Q9D7S1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tmem54Q9D7S1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tmem54Q9D7S1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tmem54Q9D7S1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tmem54Q9D7S1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms